Karel Berka - Dissemin

Papers authored by Karel Berka

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2018 B. Chantemargue, Florent Di Meo

, K. Berka

, N. Picard, H. Arnion, M. Essig

, P. Marquet, M. Otyepka, P. Trouillas

Structural patterns of the human ABCC4/MRP4 exporter in lipid bilayers rationalize clinically observed polymorphisms

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Martin Šrejber, Veronika Navrátilová, Markéta Paloncýová

, Václav Bazgier, Karel Berka

, Pavel Anzenbacher, Michal Otyepka

Membrane-attached mammalian cytochromes P450: An overview of the membrane's effects on structure, drug binding, and interactions with redox partners

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This paper is made freely available by the publisher.

Lukáš Pravda, David Sehnal, Dominik Toušek, Veronika Navrátilová, Václav Bazgier, Karel Berka

, Radka Svobodová Vařeková, Jaroslav Koča, Michal Otyepka

MOLEonline: a web-based tool for analyzing channels, tunnels and pores (2018 update)

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Tomáš Gucký, Eva Řezníčková, Tereza Radošová Muchová, Radek Jorda, Zuzana Klejová, Veronika Malínková, Karel Berka

, Václav Bazgier, Haresh Ajani

, Martin Lepšík, Vladimír Divoký, Vladimír Kryštof

Discovery of N2-(4-Amino-cyclohexyl)-9-cyclopentyl-N6-(4-morpholin-4-ylmethyl-phenyl)-9H-purine-2,6-diamine as a Potent FLT3 Kinase Inhibitor for Acute Myeloid Leukemia with FLT3 Mutations

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Lukáš Pravda, David Sehnal, Karel Berka

, Veronika Navrátilová, Dominik Toušěk, Václav Bazgier, Radka Svobodová Vařeková, Michal Otyepka, Jaroslav Koča

Channelsdb and Moleonline - Database and Tool for Analysis of Biomacromolecular Tunnels and Pores

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Radka Svobodova Varekova, Adam Midlik, Ivana Hutarova Varekova, Jan Hutar, Veronika Navratilova, Jaroslav Koca, Karel Berka

Secondary Structure Elements - Annotations and Schematic 2D Visualizations Stable for Individual Protein Families

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David Sehnal, Mandar Deshpande, Alexander Rose, Lukas Pravda, Adam Midlik, Radka Svobodová Vařeková, Saqib Mir, Karel Berka

, Sameer Velankar, Jaroslav Koca

Interactive 3D Macromolecular Structure Data Mining with MolQL and Litemol Suite

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

Karel Berka

, Stepan Srsen, Petr Slavicek

Is Machine Learning the Future of Theoretical Chemistry?

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R. Svobodova Varekova, D. Sehnal, L. Pravda, K. Berka

, M. Otyepka, J. Koca

Protein structures - a challenge of data delivery, visualization and annotation

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Karel Berka

, Štěpán Sršeň, Petr Slavíček

Je strojové učení budoucností teoretické chemie?

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2017 Matthew J. Conroy, David Sehnal, Mandar Deshpande, Radka Svobodova, Saqib Mir, Karel Berka

, Adam Midlik, Sameer Velankar, Jaroslav Koca

LiteMol: web-based three-dimensional visualization of macromolecular structure data

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David Sehnal

, Mandar Deshpande

, Radka Svobodová Vařeková, Saqib Mir

, Karel Berka

, Adam Midlik

, Lukáš Pravda

, Sameer Velankar

, Jaroslav Koča

LiteMol suite: interactive web-based visualization of large-scale macromolecular structure data

Download from www.nature.com

Veronika Navrátilová, Markéta Paloncýová, Karel Berka

, Shintaro Mise, Yuki Haga, Chisato Matsumura, Toshiyuki Sakaki, Hideyuki Inui, Michal Otyepka

Molecular insights into the role of a distal F240A mutation that alters CYP1A1 activity towards persistent organic pollutants

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Lukáš Pravda, David Sehnal, Radka Svobodová Vařeková, Veronika Navrátilová, Dominik Toušek, Karel Berka

, Michal Otyepka, Jaroslav Koča

ChannelsDB: database of biomacromolecular tunnels and pores

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Miroslav Huličiak, Václav Bazgier, Karel Berka

, Martin Kubala

RH421 binds into the ATP-binding site on the Na+/K+-ATPase

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Karel Berka

, David Sehnal, Vaclav Bazgier, Lukas Pravda, Radka Svobodova-Varekova, Michal Otyepka, Jaroslav Koca

Mole 2.5 - Tool for Detection and Analysis of Macromolecular Pores and Channels

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Eva Řezníčková, Lukáš Tenora, Pavlína Pospíšilová, Juraj Galeta, Radek Jorda, Karel Berka

, Pavel Majer, Milan Potáček, Vladimír Kryštof

ALK5 kinase inhibitory activity and synthesis of 2,3,4-substituted 5,5-dimethyl-5,6-dihydro-4H-pyrrolo[1,2-b]pyrazoles

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David Sehnal, Mandar Deshpande, Radka Svobodova Varekova, Saquib Mir, Karel Berka

, Adam Midlik, Lukas Pravda, Sameer Velankar, Jaroslav Koca

Real-Time Interactive Visualisation of Large Macromolecular Assemblies and Molecular Machines at Atomic Resolution

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Eva Otyepková, Petr Lazar, Jan Luxa, Karel Berka

, Klára Čépe, Zdeněk Sofer, Martin Pumera

, Michal Otyepka

Surface properties of MoS2 probed by inverse gas chromatography and their impact on electrocatalytic properties

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Alejandro Carazo, Lucie Hyrsova, Jan Dusek, Hana Chodounska, Alzbeta Horvatova, Karel Berka

, Vaclav Bazgier, Hongying Gan-Schreier, Waleé Chamulitrat, Eva Kudova, Petr Pavek

Acetylated deoxycholic (DCA) and cholic (CA) acids are potent ligands of pregnane X (PXR) receptor

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Papers authored by Karel Berka