All papers authored by Egon Willighagen
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2023
Ayushi Agrawal 
,
Hasan Balcı ,
Kristina Hanspers ,
Susan L. Coort ,
Marvin Martens ,
Denise N. Slenter ,
Friederike Ehrhart ,
Daniela Digles ,
Andra Waagmeester ,
Isabel Wassink ,
Tooba Abbassi-Daloii ,
Elisson N. Lopes ,
Aishwarya Iyer ,
Javier Millán Acosta ,
Lars G. Willighagen
and 7 other authors
,
Hasan Balcı ,
Kristina Hanspers ,
Susan L. Coort ,
Marvin Martens ,
Denise N. Slenter ,
Friederike Ehrhart ,
Daniela Digles ,
Andra Waagmeester ,
Isabel Wassink ,
Tooba Abbassi-Daloii ,
Elisson N. Lopes ,
Aishwarya Iyer ,
Javier Millán Acosta ,
Lars G. Willighagen
and 7 other authors
WikiPathways 2024: next generation pathway database
Download from doi.org
Michael W. Mullowney ,
Katherine R. Duncan ,
Somayah S. Elsayed ,
Neha Garg ,
Justin J. J. van der Hooft ,
Nathaniel I. Martin ,
David Meijer ,
Barbara R. Terlouw ,
Friederike Biermann ,
Kai Blin ,
Janani Durairaj ,
Marina Gorostiola González ,
Eric Jan Nikolaus Helfrich ,
Florian Huber ,
Stefan Leopold-Messer
and 43 other authors
,
Katherine R. Duncan ,
Somayah S. Elsayed ,
Neha Garg ,
Justin J. J. van der Hooft ,
Nathaniel I. Martin ,
David Meijer ,
Barbara R. Terlouw ,
Friederike Biermann ,
Kai Blin ,
Janani Durairaj ,
Marina Gorostiola González ,
Eric Jan Nikolaus Helfrich ,
Florian Huber ,
Stefan Leopold-Messer
and 43 other authors
Artificial intelligence for natural product drug discovery
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2022
Zhixu Ni ,
Michele Wölk ,
Geoff Jukes,
Karla Mendivelso Espinosa,
Robert Ahrends ,
Lucila Aimo ,
Jorge Alvarez-Jarreta ,
Simon Andrews ,
Robert Andrews,
Alan Bridge,
Geremy C. Clair ,
Matthew J. Conroy ,
Eoin Fahy,
Caroline Gaud ,
Laura Goracci
and 19 other authors
,
Michele Wölk ,
Geoff Jukes,
Karla Mendivelso Espinosa,
Robert Ahrends ,
Lucila Aimo ,
Jorge Alvarez-Jarreta ,
Simon Andrews ,
Robert Andrews,
Alan Bridge,
Geremy C. Clair ,
Matthew J. Conroy ,
Eoin Fahy,
Caroline Gaud ,
Laura Goracci
and 19 other authors
Guiding the choice of informatics software and tools for lipidomics research applications
Download from www.nature.com
Charles Tapley Hoyt,
Meghan A. Balk ,
Tiffany J. Callahan,
Hoyt Ct,
Daniel Domingo-Fernández,
Melissa Anne Haendel,
Callahan Tj,
Harshad B. Hegde ,
Daniel S. Himmelstein ,
Klas,
Haendel Ma,
Klas Karis ,
John Kunze,
Tiago Lubiana,
Hegde Hb
and 11 other authors
,
Tiffany J. Callahan,
Hoyt Ct,
Daniel Domingo-Fernández,
Melissa Anne Haendel,
Callahan Tj,
Harshad B. Hegde ,
Daniel S. Himmelstein ,
Klas,
Haendel Ma,
Klas Karis ,
John Kunze,
Tiago Lubiana,
Hegde Hb
and 11 other authors
Unifying the Identification of Biomedical Entities with the Bioregistry
Download from doi.org
Hiba Mohammed Taha ,
H. M. Taha,
Reza Aalizadeh ,
Nikiforos Alygizakis ,
Jean-Philippe Antignac ,
Hans Peter H. Arp ,
Richard Bade ,
Nancy Baker ,
Lidia Belova ,
Lubertus Bijlsma ,
Evan E. Bolton ,
Werner Brack ,
Alberto Celma ,
Wen-Ling Chen ,
Ľuboš Čirka
and 85 other authors
Download from doi.org
,
H. M. Taha,
Reza Aalizadeh ,
Nikiforos Alygizakis ,
Jean-Philippe Antignac ,
Hans Peter H. Arp ,
Richard Bade ,
Nancy Baker ,
Lidia Belova ,
Lubertus Bijlsma ,
Evan E. Bolton ,
Werner Brack ,
Alberto Celma ,
Wen-Ling Chen ,
Ľuboš Čirka
and 85 other authors
Download from doi.org
Adriano Rutz ,
Maria Sorokina ,
Jakub Galgonek ,
Daniel Mietchen ,
Egon Willighagen ,
Arnaud Gaudry ,
James G. Graham,
Ralf Stephan ,
Roderic Page ,
Jiří Vondrášek ,
Christoph Steinbeck ,
Guido F. Pauli ,
Jean-Luc Wolfender ,
Jonathan Bisson ,
Pierre-Marie Allard
,
Maria Sorokina ,
Jakub Galgonek ,
Daniel Mietchen ,
Egon Willighagen ,
Arnaud Gaudry ,
James G. Graham,
Ralf Stephan ,
Roderic Page ,
Jiří Vondrášek ,
Christoph Steinbeck ,
Guido F. Pauli ,
Jean-Luc Wolfender ,
Jonathan Bisson ,
Pierre-Marie Allard
The LOTUS initiative for open knowledge management in natural products research
Download from doi.org
Markus Stocker ,
Tina Heger ,
Artur Schweidtmann ,
Hanna Ćwiek-Kupczyńska ,
Lyubomir Penev ,
Milan Dojchinovski,
Egon Willighagen ,
Maria-Esther Vidal ,
Houcemeddine Turki ,
Daniel Balliet ,
Ilaria Tiddi ,
Tobias Kuhn ,
Daniel Mietchen ,
Oliver Karras ,
Lars Vogt
and 4 other authors
Download from riojournal.com
,
Tina Heger ,
Artur Schweidtmann ,
Hanna Ćwiek-Kupczyńska ,
Lyubomir Penev ,
Milan Dojchinovski,
Egon Willighagen ,
Maria-Esther Vidal ,
Houcemeddine Turki ,
Daniel Balliet ,
Ilaria Tiddi ,
Tobias Kuhn ,
Daniel Mietchen ,
Oliver Karras ,
Lars Vogt
and 4 other authors
Download from riojournal.com
Michaela Sochorová ,
Kateřina Vávrová ,
Maria Fedorova ,
Zhixu Ni ,
Denise Slenter ,
Martina Kutmon ,
Egon L. Willighagen ,
Sophia Letsiou ,
Daniel Töröcsik ,
Martina Marchetti-Deschmann ,
Samuele Zoratto ,
Christopher Kremslehner ,
Florian Gruber
,
Kateřina Vávrová ,
Maria Fedorova ,
Zhixu Ni ,
Denise Slenter ,
Martina Kutmon ,
Egon L. Willighagen ,
Sophia Letsiou ,
Daniel Töröcsik ,
Martina Marchetti-Deschmann ,
Samuele Zoratto ,
Christopher Kremslehner ,
Florian Gruber
Research Techniques Made Simple: Lipidomic Analysis in Skin Research
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2021
Birgit H. M. Meldal ,
Livia Perfetto ,
Colin Combe,
Tiago Lubiana,
João Vitor Ferreira Cavalcante,
Hema Bye-A.-Jee,
Andra Waagmeester ,
Noemi del-Toro ,
Anjali Shrivastava,
Elisabeth Barrera,
Edith Wong,
Bernhard Mlecnik ,
Gabriela Bindea ,
Kalpana Panneerselvam,
Egon Willighagen
and 4 other authors
,
Livia Perfetto ,
Colin Combe,
Tiago Lubiana,
João Vitor Ferreira Cavalcante,
Hema Bye-A.-Jee,
Andra Waagmeester ,
Noemi del-Toro ,
Anjali Shrivastava,
Elisabeth Barrera,
Edith Wong,
Bernhard Mlecnik ,
Gabriela Bindea ,
Kalpana Panneerselvam,
Egon Willighagen
and 4 other authors
Complex Portal 2022: new curation frontiers
Download from doi.org
Kristina Hanspers ,
Martina Kutmon ,
Susan L. Coort ,
Daniela Digles ,
Lauren J. Dupuis ,
Friederike Ehrhart ,
Finterly Hu ,
Elisson N. Lopes ,
Marvin Martens ,
Nhung Pham ,
Woosub Shin ,
Denise N. Slenter ,
Andra Waagmeester ,
Egon L. Willighagen ,
Laurent A. Winckers
and 2 other authors
,
Martina Kutmon ,
Susan L. Coort ,
Daniela Digles ,
Lauren J. Dupuis ,
Friederike Ehrhart ,
Finterly Hu ,
Elisson N. Lopes ,
Marvin Martens ,
Nhung Pham ,
Woosub Shin ,
Denise N. Slenter ,
Andra Waagmeester ,
Egon L. Willighagen ,
Laurent A. Winckers
and 2 other authors
Ten simple rules for creating reusable pathway models for computational analysis and visualization
Download from doi.org
Friederike Ehrhart ,
Annika Jacobsen ,
Maria Rigau ,
Mattia Bosio,
Rajaram Kaliyaperumal,
Jeroen F. J. Laros,
Egon L. Willighagen ,
Alfonso Valencia ,
Marco Roos ,
Salvador Capella-Gutierrez ,
Leopold M. G. Curfs ,
Chris T. Evelo
,
Annika Jacobsen ,
Maria Rigau ,
Mattia Bosio,
Rajaram Kaliyaperumal,
Jeroen F. J. Laros,
Egon L. Willighagen ,
Alfonso Valencia ,
Marco Roos ,
Salvador Capella-Gutierrez ,
Leopold M. G. Curfs ,
Chris T. Evelo
A catalogue of 863 Rett-syndrome-causing MECP2 mutations and lessons learned from data integration
Download from www.nature.com
2020
Marvin Martens ,
Ammar Ammar ,
Anders Riutta ,
Andra Waagmeester ,
Denise N. Slenter ,
Kristina Hanspers ,
Ryan A. Miller ,
Daniela Digles ,
Elisson N. Lopes ,
Friederike Ehrhart ,
Lauren J. Dupuis ,
Laurent A. Winckers ,
Susan L. Coort ,
Egon L. Willighagen ,
Chris T. Evelo
and 2 other authors
,
Ammar Ammar ,
Anders Riutta ,
Andra Waagmeester ,
Denise N. Slenter ,
Kristina Hanspers ,
Ryan A. Miller ,
Daniela Digles ,
Elisson N. Lopes ,
Friederike Ehrhart ,
Lauren J. Dupuis ,
Laurent A. Winckers ,
Susan L. Coort ,
Egon L. Willighagen ,
Chris T. Evelo
and 2 other authors
WikiPathways: connecting communities
Download from academic.oup.com
Panagiotis Isigonis ,
Antreas Afantitis,
Dalila Antunes,
Alena Bartonova,
Ali Beitollahi,
Nils Bohmer,
Evert Bouman,
Qasim Chaudhry,
Mihaela Roxana Cimpan,
Emil Cimpan,
Shareen Doak,
Damien Dupin ,
Doreen Fedrigo,
Valérie Fessard,
Jesus M. de la Fuente
and 31 other authors
,
Antreas Afantitis,
Dalila Antunes,
Alena Bartonova,
Ali Beitollahi,
Nils Bohmer,
Evert Bouman,
Qasim Chaudhry,
Mihaela Roxana Cimpan,
Emil Cimpan,
Shareen Doak,
Damien Dupin ,
Doreen Fedrigo,
Valérie Fessard,
Jesus M. de la Fuente
and 31 other authors
Risk Governance of Emerging Technologies Demonstrated in Terms of its Applicability to Nanomaterials
Download from api.wiley.com
Olaf Wolkenhauer,
Marek Ostaszewski ,
Alexander Mazein ,
Marc E. Gillespie ,
Inna Kuperstein,
Anna Niarakis ,
Henning Hermjakob ,
Falk Schreiber,
Andreas Dräger ,
Alexander R. Pico,
Emek Demir,
Egon L. Willighagen ,
Laura I. Furlong,
Chris T. Evelo,
Emmanuel Barillot
and 10 other authors
Download from doi.org
,
Alexander Mazein ,
Marc E. Gillespie ,
Inna Kuperstein,
Anna Niarakis ,
Henning Hermjakob ,
Falk Schreiber,
Andreas Dräger ,
Alexander R. Pico,
Emek Demir,
Egon L. Willighagen ,
Laura I. Furlong,
Chris T. Evelo,
Emmanuel Barillot
and 10 other authors
Download from doi.org
Andra Waagmeester ,
Gregory Stupp ,
Sebastian Burgstaller-Muehlbacher ,
Benjamin M. Good ,
Malachi Griffith ,
Obi L. Griffith ,
Kristina Hanspers ,
Henning Hermjakob ,
Toby S. Hudson ,
Kevin Hybiske ,
Sarah M. Keating ,
Magnus Manske ,
Michael Mayers ,
Daniel Mietchen ,
Elvira Mitraka
and 15 other authors
,
Gregory Stupp ,
Sebastian Burgstaller-Muehlbacher ,
Benjamin M. Good ,
Malachi Griffith ,
Obi L. Griffith ,
Kristina Hanspers ,
Henning Hermjakob ,
Toby S. Hudson ,
Kevin Hybiske ,
Sarah M. Keating ,
Magnus Manske ,
Michael Mayers ,
Daniel Mietchen ,
Elvira Mitraka
and 15 other authors
Wikidata as a knowledge graph for the life sciences
Download from doi.org
2019
Andra Waagmeester ,
Gregory Stupp ,
Sebastian Burgstaller-Muehlbacher ,
Benjamin M. Good ,
Malachi Griffith ,
Obi Griffith ,
Kristina Hanspers ,
Henning Hermjakob ,
Toby S. Hudson,
Kevin Hybiske ,
Sarah M. Keating ,
Magnus Manske ,
Michael Mayers ,
Daniel Mietchen,
Elvira Mitraka
and 15 other authors
,
Gregory Stupp ,
Sebastian Burgstaller-Muehlbacher ,
Benjamin M. Good ,
Malachi Griffith ,
Obi Griffith ,
Kristina Hanspers ,
Henning Hermjakob ,
Toby S. Hudson,
Kevin Hybiske ,
Sarah M. Keating ,
Magnus Manske ,
Michael Mayers ,
Daniel Mietchen,
Elvira Mitraka
and 15 other authors
Wikidata as a FAIR knowledge graph for the life sciences
Upload
2017
Denise N. Slenter,
Martina Kutmon ,
Kristina Hanspers,
Anders Riutta ,
Jacob Windsor,
Nuno Nunes,
Jonathan Mélius,
Elisa Cirillo ,
Susan L. Coort ,
Daniela Digles ,
Friederike Ehrhart,
Pieter Giesbertz,
Marianthi Kalafati,
Marvin Martens,
Ryan Miller
and 7 other authors
,
Kristina Hanspers,
Anders Riutta ,
Jacob Windsor,
Nuno Nunes,
Jonathan Mélius,
Elisa Cirillo ,
Susan L. Coort ,
Daniela Digles ,
Friederike Ehrhart,
Pieter Giesbertz,
Marianthi Kalafati,
Marvin Martens,
Ryan Miller
and 7 other authors
WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research
Download from doi.org
Merlijn van Rijswijk ,
Charlie Beirnaert ,
Christophe Caron,
Marta Cascante,
Victoria Dominguez ,
Warwick B. Dunn,
Timothy M. D. Ebbels,
Franck Giacomoni,
Alejandra Gonzalez-Beltran ,
Thomas Hankemeier ,
Kenneth Haug ,
Jose L. Izquierdo-Garcia,
Rafael C. Jimenez ,
Fabien Jourdan,
Namrata Kale
and 25 other authors
,
Charlie Beirnaert ,
Christophe Caron,
Marta Cascante,
Victoria Dominguez ,
Warwick B. Dunn,
Timothy M. D. Ebbels,
Franck Giacomoni,
Alejandra Gonzalez-Beltran ,
Thomas Hankemeier ,
Kenneth Haug ,
Jose L. Izquierdo-Garcia,
Rafael C. Jimenez ,
Fabien Jourdan,
Namrata Kale
and 25 other authors
The future of metabolomics in ELIXIR
Download from f1000research.com
Egon L. Willighagen ,
John W. Mayfield ,
Jonathan Alvarsson ,
Arvid Berg,
Lars Carlsson ,
Nina Jeliazkova ,
Stefan Kuhn ,
Tomáš Pluskal ,
Miquel Rojas-Chertó ,
Ola Spjuth ,
Gilleain Torrance ,
Chris T. Evelo ,
Rajarshi Guha ,
Christoph Steinbeck
Download from link.springer.com
,
John W. Mayfield ,
Jonathan Alvarsson ,
Arvid Berg,
Lars Carlsson ,
Nina Jeliazkova ,
Stefan Kuhn ,
Tomáš Pluskal ,
Miquel Rojas-Chertó ,
Ola Spjuth ,
Gilleain Torrance ,
Chris T. Evelo ,
Rajarshi Guha ,
Christoph Steinbeck
Download from link.springer.com
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