David J. Pagliarini

All papers authored by David J. Pagliarini

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2022 Jarred W. Rensvold, Evgenia Shishkova, Yuriy Sverchkov

, Ian J. Miller, Arda Cetinkaya

, Angela Pyle, Mateusz Manicki, Dain R. Brademan

, Yasemin Alanay, Julian Raiman, Adam Jochem, Paul D. Hutchins, Sean R. Peters, Vanessa Linke

, Katherine A. Overmyer

and 11 other authors

Defining mitochondrial protein functions through deep multiomic profiling

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2018 David J. Pagliarini

A path to the powerhouse: systems-to-structure approaches for studying mitochondrial proteins

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2017 Mike T. Veling, Andrew G. Reidenbach, Elyse C. Freiberger, Nicholas W. Kwiecien, Paul D. Hutchins, Michael J. Drahnak, Adam Jochem, Arne Ulbrich, Matthew J. P. Rush, Jason D. Russell, Joshua J. Coon, Dave Pagliarini

Multi-omic mitoprotease profiling defines a role for Oct1p in coenzyme Q production

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Christophier P. Lapointe, Jonathan A. Stefely, Adam Jochem, Paul D. Hutchins, Gary M. Wilson, Nicholas W. Kwiecien, Joshua J. Coon, Marvin Wickens, David J. Pagliarini

Post-Transcriptional Control of Coenzyme Q Biosynthesis Revealed by Transomic Analysis of the RNA-Binding Protein Puf3p

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Xiao Guo, Natalie M. Niemi, Paul D. Hutchins, Samson G. F. Condon, Adam Jochem, Arne Ulbrich, Alan J. Higbee, Jason D. Russell, Alessandro Senes

, Joshua J. Coon, David J. Pagliarini

Ptc7p Dephosphorylates Select Mitochondrial Proteins to Enhance Metabolic Function

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2016 Jonathan A. Stefely, Nicholas W. Kwiecien, Elyse C. Freiberger, Alicia L. Richards, Adam Jochem, Matthew J. P. Rush, Arne Ulbrich, Kyle P. Robinson, Paul D. Hutchins, Mike T. Veling, Xiao Guo, Zachary A. Kemmerer, Kyle J. Connors, Edna A. Trujillo, Jacob Sokol and 5 other authors

Mitochondrial protein functions elucidated by multi-omic mass spectrometry profiling

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David J. Pagliarini

Transomics: Mitochondrial Systems Analyses Get Supercomplex

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2015 Vincent S. Tagliabracci, Sandra E. Wiley, Xiao Guo, Lisa N. Kinch, Eric Durrant, Jianzhong Wen, Junyu Xiao, Jixin Cui, Kim B. Nguyen, James L. Engel, Joshua J. Coon, Nick Grishin, Lorenzo A. Pinna, David J. Pagliarini

, Jack E. Dixon

A Single Kinase Generates the Majority of the Secreted Phosphoproteome

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Katherine A. Overmyer, Charles R. Evans, Nathan R. Qi, Catherine E. Minogue, Joshua J. Carson, Christopher J. Chermside-Scabbo, Lauren G. Koch, Steven L. Britton, David J. Pagliarini

, Joshua J. Coon, Charles F. Burant

Maximal Oxidative Capacity during Exercise Is Associated with Skeletal Muscle Fuel Selection and Dynamic Changes in Mitochondrial Protein Acetylation

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Catherine E. Minogue, Alexander S. Hebert, Jarred W. Rensvold, Michael S. Westphall, David J. Pagliarini

, Joshua J. Coon

Multiplexed Quantification for Data-Independent Acquisition

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2014 Danielle C. Lohman, Farhad Forouhar, Emily T. Beebe, Matthew S. Stefely, Catherine E. Minogue, Arne Ulbrich, Jonathan A. Stefely, Shravan Sukumar, Marta Luna-Sánchez, Adam Jochem, Scott Lew, Jayaraman Seetharaman, Rong Xiao, Huang Wang, Michael S. Westphall and 8 other authors

Mitochondrial COQ9 is a lipid-binding protein that associates with COQ7 to enable coenzyme Q biosynthesis

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Ambalika S. Khadria, Benjamin K. Mueller, Jonathan A. Stefely, Chin Huat Tan, David J. Pagliarini

, Alessandro Senes

A Gly-Zipper Motif Mediates Homodimerization of the Transmembrane Domain of the Mitochondrial Kinase ADCK3

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Derek J. Bailey, Molly T. McDevitt, Michael S. Westphall, David J. Pagliarini

, Joshua J. Coon

Intelligent Data Acquisition Blends Targeted and Discovery Methods

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Stephen D. Dingley, Erzsebet Polyak, Julian Ostrovsky, Satish Srinivasan, Icksoo Lee, Amy B. Rosenfeld, Mai Tsukikawa, Rui Xiao, Mary A. Selak, Joshua J. Coon, Alexander S. Hebert, Paul A. Grimsrud, Young Joon Kwon, David J. Pagliarini

, Xiaowu Gai and 4 other authors

Mitochondrial DNA Variant in COX1 Subunit Significantly Alters Energy Metabolism of Geographically Divergent Wild Isolates in Caenorhabditis elegans

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Timothy W. Rhoads, Christopher M. Rose, Derek J. Bailey, Nicholas M. Riley, Rosalynn C. Molden, Amelia J. Nestler, Anna E. Merrill, Lloyd M. Smith, Alexander S. Hebert, Michael S. Westphall, David J. Pagliarini

, Benjamin Aaron Garcia, Joshua J. Coon

Neutron-Encoded Mass Signatures for Quantitative Top-Down Proteomics∥

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2013 David J. Pagliarini

, Jared Rutter

Hallmarks of a new era in mitochondrial biochemistry

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Natalie M. Niemi, David J. Pagliarini

Utilizing dynamically regulated phosphorylation as a means to modulate mitochondrial metabolism

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Alexander S. Hebert, Anna E. Merrill, Jonathan A. Stefely, Derek J. Bailey, Craig D. Wenger, Michael S. Westphall, David J. Pagliarini

, Joshua J. Coon

Amine-reactive Neutron-encoded Labels for Highly Plexed Proteomic Quantitation*

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Amelia J. Still, Brendan J. Floyd, Alexander S. Hebert, Craig A. Bingman, Joshua J. Carson, Drew R. Gunderson, Brendan K. Dolan, Paul A. Grimsrud, Kristin E. Dittenhafer-Reed, Donald S. Stapleton, Mark P. Keller, Michael S. Westphall, John M. Denu, Alan D. Attie, Joshua J. Coon and 1 other authors

Quantification of Mitochondrial Acetylation Dynamics Highlights Prominent Sites of Metabolic Regulation*

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Alexander S. Hebert, Anna E. Merrill, Derek J. Bailey, Amelia J. Still, Michael S. Westphall, Eric R. Strieter, David J. Pagliarini

, Joshua J. Coon

Neutron-encoded mass signatures for multiplexed proteome quantification

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All papers authored by David J. Pagliarini