Philip Hugenholtz

Papers authored by Philip Hugenholtz

This paper is made freely available by the publisher.

2009 Konstantinos Mavrommatis, Sabine Gronow, Rüdiger Pukall, Christine Rohde, Elizabeth Saunders, Miriam Land, David Sims, Alla Lapidus, Feng Chen, Cheryl Kuske, Alex Copeland, Tijana Glavina Del Rio, Matt Nolan, Susan Lucas, Hope Tice and 25 other authors

Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845T)

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Alex Copeland, Johannes Sikorski, Alla Lapidus, Matt Nolan, Tijana Glavina Del Rio, Susan Lucas, Feng Chen, Hope Tice, Sam Pitluck, Jan-Fang Cheng

, Rüdiger Pukall, Olga Chertkov, Thomas Brettin, Cliff Han, John C. Detter and 17 other authors

Complete genome sequence of Atopobium parvulum type strain (IPP 1246T)

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Stefan Spring, Alla Lapidus, Tijana Glavina Del Rio, Tijana Glavina Del Rio, Hope Tice, Alex Copeland, Jan-Fang Cheng

, Susan Lucas, Feng Chen, Matt Nolan, David Bruce, Lynne Goodwin, Sam Pitluck, Natalia Ivanova, Konstantinos Mavromatis and 24 other authors

Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3T)

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Stefan Spring, Markus Göker, Markus Goker, Susanne Schneider, Alla Lapidus, Tijana Glavina Del Rio, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng

, Feng Chen, Matt Nolan, David Bruce, Lynne Goodwin, Sam Pitluck, Natalia Ivanova and 24 other authors

Complete genome sequence of Desulfomicrobium baculatum type strain (XT)

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Matt Nolan, Elke Lang, Tijana Glavina Del Rio, Tijana Glavina Del Rio, Hope Tice, Alex Copeland, Jan-Fang Cheng, Susan Lucas, Feng Chen, David Bruce, Lynne Goodwin, Sam Pitluck, Natalia Ivanova, Konstantinos Mavrommatis, Natalia Mikhailova and 20 other authors

Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICPT)

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Alla Lapidus, Rüdiger Pukall, Kurt LaButtii, Alex Copeland, Tijana Glavina Del Rio, Matt Nolan, Feng Chen, Susan Lucas, Hope Tice, Jan-Fang Cheng

, David Bruce, Lynne Goodwin, Sam Pitluck, Manfred Rohde, Markus Göker and 13 other authors

Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10T)

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David Sims, Thomas Brettin, John C. Detter, Cliff Han, Alla Lapidus, Alex Copeland, Tijana Glavina Del Rio, Tijana Glavina Del Rio, Matt Nolan, Feng Chen, Susan Lucas, Hope Tice, Jan-Fang Cheng

, David Bruce, Lynne Goodwin and 21 other authors

Complete genome sequence of Kytococcus sedentarius type strain (541T)

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Alla Lapidus, Shanmugam Mayilraj, Feng Chen, Alex Copeland, Tijana Glavina Del Rio, Tijana Glavina Del Rio, Matt Nolan, Susan Lucas, Hope Tice, Jan-Fang Cheng

, Olga Chertkov, David Bruce, Lynne Goodwin, Sam Pitluck, Manfred Rohde and 24 other authors

Complete genome sequence of Actinosynnema mirum type strain (101T)

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Miriam Land, Rüdiger Pukall, Birte Abt, Markus Göker, Manfred Rohde, Tijana Glavina Del Rio, Tijana Glavina Del Rio, Hope Tice, Alex Copeland, Jan-Fang Cheng

, Susan Lucas, Feng Chen, Matt Nolan, David Bruce, Lynne Goodwin and 23 other authors

Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122T)

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Matthias H. Tschop, Philip Hugenholtz

, Christopher L. Karp

Getting to the core of the gut microbiome

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D. P. R. Herlemann, O. Geissinger, W. Ikeda-Ohtsubo, V. Kunin, H. Sun, A. Lapidus, P. Hugenholtz

, A. Brune

Genomic Analysis of “Elusimicrobium minutum,” the First Cultivated Representative of the Phylum “Elusimicrobia” (Formerly Termite Group 1)

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Philip Hugenholtz

, Nikos C. Kyrpides

A changing of the guard

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Konstantinos Mavromatis, Natalia Ivanova, Iain Anderson, Athanasios Lykidis, Sean D. Hooper, Hui Sun, Victor Kunin, Alla Lapidus, Philip Hugenholtz

, Bharat Patel

, Nikos C. Kyrpides

Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii

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Bernhard Knierim, Rick I. Webb, Paul Wilmes, Phil Hugenholtz

, Jan Liphardt, Kent McDonald, Jill Banfield, Manfred Auer

Correlative tem and fish imaging of microbial communities

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Erik Kristiansson, Philip Hugenholtz

, Daniel Dalevi

ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes

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Mircea Podar, Martin Keller, Philip Hugenholtz

Single Cell Whole Genome Amplification of Uncultivated Organisms

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2008 Victor Kunin, Alex Copeland, Alla Lapidus, Konstantinos Mavromatis, Philip Hugenholtz

A bioinformatician's guide to metagenomics

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Susannah G. Tringe

, Philip Hugenholtz

A renaissance for the pioneering 16S rRNA gene

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Kelly C. Wrighton, Peter Agbo, Falk Warnecke, Karrie A. Weber, Eoin L. Brodie

, Todd Z. DeSantis, Philip Hugenholtz

, Gary L. Andersen, John D. Coates

A novel ecological role of the Firmicutes identified in thermophilic microbial fuel cells

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Philip Hugenholtz

, Gene W. Tyson

Metagenomics

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Papers authored by Philip Hugenholtz