David Ussery - Dissemin

All papers authored by David Ussery

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2021 Bikram Gautam

, Qinglin Wu, Gaumani Gyanwali

, David Wayne Ussery

Assessment of Bacterial Load in Polyethylene Terephthalate (PET) Bottled Water Marketed in Kathmandu Valley, Nepal

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2016 Scott Federhen, Ramon Rossello-Mora

, Hans-Peter Klenk, Brian J. Tindall, Konstantinos T. Konstantinidis, William B. Whitman, Daniel Brown, David Labeda, David Ussery

, George M. Garrity, Rita R. Colwell, Nur Hasan, Joerg Graf

, Aidan Parte, Pablo Yarza and 16 other authors

Meeting report: GenBank microbial genomic taxonomy workshop (12–13 May, 2015)

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2015 Collin M. Timm, Alisha G. Campbell, Sagar M. Utturkar

, Se-Ran Jun, Rebecca E. Parales, Watumesa A. Tan, R. A. Luu, Michael S. Robeson, Tse-Yuan S. Lu, Sara Jawdy, Steven D. Brown, David W. Ussery

, Christopher W. Schadt, Gerald A. Tuskan, Mitchel J. Doktycz and 2 other authors

Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment

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Iliana Espinoza-Valles, Gary J. Vora, Baochuan Lin, Pimlapas Leekitcharoenphon, Adrián González-Castillo, Dave W. Ussery

, Lone Høj, Bruno Gomez-Gil, Bruno Gómez-Gil

Unique and conserved genome regions in Vibrio harveyi and related species in comparison with the shrimp pathogen Vibrio harveyi CAIM 1792

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Se-Ran Jun, Michael R. Leuze, Intawat Nookaew, Edward C. Uberbacher, Miriam Land, Qian Zhang, Visanu Wanchai, Juanjuan Chai, Morten Nielsen, Thomas Trolle, Ole Lund, Gregory S. Buzard, Thomas D. Pedersen, Trudy M. Wassenaar, David W. Ussery

Ebolaviruscomparative genomics

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Trudy Wassenaar, David Ussery

, Lene Nielsen, Hanne Ingmer

Review and phylogenetic analysis ofqacgenes that reduce susceptibility to quaternary ammonium compounds inStaphylococcusspecies

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Miriam Land, Loren Hauser, Se-Ran Jun, Intawat Nookaew, Michael R. Leuze, Tae-Hyuk Ahn, Tatiana Karpinets, Ole Lund, Guruprased Kora, Trudy Wassenaar, Suresh Poudel, David W. Ussery

Insights from 20 years of bacterial genome sequencing

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This paper is available in a repository.

Amjad Ali, Anam Naz, Siomar C. Soares, Marriam Bakhtiar, Sandeep Tiwari

, Syed S. Hassan, Fazal Hanan, Rommel Ramos, Ulisses Pereira, Debmalya Barh, Henrique César Pereira Figueiredo, David W. Ussery

, Anderson Miyoshi, Artur Silva, Vasco Azevedo

Pan-Genome Analysis of Human Gastric PathogenH. pylori: Comparative Genomics and Pathogenomics Approaches to Identify Regions Associated with Pathogenicity and Prediction of Potential Core Therapeutic Targets

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2014 Cristiane C. Thompson, Gilda R. Amaral, Mariana Campeão, Mariana Campe{\~a}o, Robert A. Edwards

, Martin F. Polz, Bas E. Dutilh

, David W. Ussery

, Tomoo Sawabe, Jean Swings, Fabiano L. Thompson

Microbial taxonomy in the post-genomic era: Rebuilding from scratch?

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Kjersti Haugum, Jostein Johansen, Christina Gabrielsen, Lin Thorstensen Brandal, Kåre Bergh, David Wayne Ussery

, Finn Drabløs

, Jan Egil Afset

Comparative Genomics to Delineate Pathogenic Potential in Non-O157 Shiga Toxin-Producing Escherichia coli (STEC) from Patients with and without Haemolytic Uremic Syndrome (HUS) in Norway

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Oksana Lukjancenko, David W. Ussery

Vibrio chromosome-specific families

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Dawn Field, Peter Sterk, Renzo Kottmann, J. Wim De Smet, Linda Amaral-Zettler, Guy Cochrane, James R. Cole, Neil Davies

, Peter Dawyndt, George M. Garrity, Jack A. Gilbert, Frank Oliver Glöckner, Lynette Hirschman, Hans-Peter Klenk, Rob Knight and 14 other authors

Genomic Standards Consortium Projects

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Miriam L. Land, Doug Hyatt, Se-Ran Jun, Guruprasad H. Kora, Loren J. Hauser, Oksana Lukjancenko, David W. Ussery

Quality scores for 32,000 genomes

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2013 Oksana Lukjancenko, Martin Christen Thomsen, Mette Voldby Larsen, David Wayne Ussery

PanFunPro: PAN-genome analysis based on FUNctional PROfiles

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Jon Bohlin, Ola Brynildsrud, Tammi Vesth, Eystein Skjerve, David W. Ussery

Amino Acid Usage Is Asymmetrically Biased in AT- and GC-Rich Microbial Genomes

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Carlos G. Acevedo-Rocha

, Gang Fang, Markus Schmidt, David W. Ussery

, Antoine Danchin

From essential to persistent genes: a functional approach to constructing synthetic life

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Tammi Vesth, Karin Lagesen, Öncel Acar, David Ussery

CMG-Biotools, a Free Workbench for Basic Comparative Microbial Genomics

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Anne Holch, Kristen Webb, Oksana Lukjancenko, David Ussery

, Benjamin M. Rosenthal, Lone Gram

Genome Sequencing Identifies Two Nearly Unchanged Strains of Persistent Listeria monocytogenes Isolated at Two Different Fish Processing Plants Sampled 6 Years Apart

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Dan B. Jensen, David W. Ussery

Bayesian prediction of microbial oxygen requirement

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Asli Ismihan Ozen, Tammi Vesth, David W. Ussery

Comparative Genomics

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All papers authored by David Ussery