Kathryn Holt - Dissemin

Papers authored by Kathryn Holt

This paper is made freely available by the publisher.

2015 Laura I. Rusu, Kelly L. Wyres, Matthias Reumann, Carlos Queiroz, Alexe Bojovschi, Tom Conway, Saurabh Garg, David J. Edwards, Geoff Hogg, Kathryn E. Holt

A platform for leveraging next generation sequencing for routine microbiology and public health use

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Kathryn E. Holt

, Heiman Wertheim, Ruth N. Zadoks, Stephen Baker, Chris A. Whitehouse, David Dance, Adam Jenney, Thomas R. Connor, Li Yang Hsu

, Julïette Severin, Sylvain Brisse, Hanwei Cao, Jonathan Wilksch, Claire Gorrie, Mark B. Schultz and 14 other authors

Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health

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2014 Steven J. Nigro, Kathryn E. Holt

, Derek Pickard, Ruth M. Hall

Carbapenem and amikacin resistance on a large conjugative Acinetobacter baumannii plasmid

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Michael Inouye, Harriet Dashnow, Lesley-Ann Raven, Mark B. Schultz, Bernard J. Pope, Takehiro Tomita, Justin Zobel, Kathryn E. Holt

SRST2: Rapid genomic surveillance for public health and hospital microbiology labs

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Mohammad Hamidian, Kathryn E. Holt

, Ruth M. Hall

The complete sequence of Salmonella genomic island SGI2

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Michael L. Walker, Kathryn E. Holt

, Gary P. Anderson, Shu Mei Teo, Peter D. Sly, Patrick G. Holt, Michael Inouye

Elucidation of Pathways Driving Asthma Pathogenesis: Development of a Systems-Level Analytic Strategy

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Mohammad Hamidian, Kathryn E. Holt

, Ruth M. Hall

The complete sequence of Salmonella genomic island SGI1-K

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This paper is available in a repository.

Johanna J. Kenyon, Kathryn E. Holt

, Derek Pickard, Gordon Dougan, Ruth M. Hall

Insertions in the OCL1 locus of Acinetobacter baumannii lead to shortened lipooligosaccharides

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Karolina Dimovski, Hanwei Cao, Odilia Lc C. Wijburg, Richard A. Strugnell, Radha K. Mantena, Margaret Whipp, Geoff Hogg, Kathryn E. Holt

Analysis of Salmonella enterica Serovar Typhimurium Variable-Number Tandem-Repeat Data for Public Health Investigation Based on Measured Mutation Rates and Whole-Genome Sequence Comparisons

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Mohammad Hamidian, Johanna J. Kenyon, Kathryn E. Holt

, Derek Pickard, Ruth M. Hall

A conjugative plasmid carrying the carbapenem resistance gene blaOXA-23 in AbaR4 in an extensively resistant GC1 Acinetobacter baumannii isolate

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Kelly L. Wyres, Thomas C. Conway, Saurabh Garg

, Carlos Queiroz, Matthias Reumann, Kathryn Holt

, Laura I. Rusu

WGS Analysis and Interpretation in Clinical and Public Health Microbiology Laboratories: What Are the Requirements and How Do Existing Tools Compare?

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Timothy P. Stinear

, Kathryn E. Holt

, Kyra Chua

, Justin Stepnell, Kellie L. Tuck, Geoffrey Coombs, Paul Francis Harrison, Torsten Seemann

, Benjamin P. Howden

Adaptive Change Inferred from Genomic Population Analysis of the ST93 Epidemic Clone of Community-Associated Methicillin-Resistant Staphylococcus aureus

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

Christopher J. Harmer, Kathryn E. Holt

, Ruth M. Hall

A type 2 A/C2 plasmid carrying the aacC4 apramycin resistance gene and the erm (42) erythromycin resistance gene recovered from two Salmonella enterica serovars

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2013 Vanessa K. Wong, Derek J. Pickard, Lars Barquist

, Karthikeyan Sivaraman, Andrew J. Page

, Peter J. Hart, Mark J. Arends, Kathryn E. Holt

, Leanne Kane, Lynda F. Mottram, Louise Ellison, Ruben Bautista, Chris J. McGee, Sally J. Kay, Thomas M. Wileman and 5 other authors

Characterization of the yehUT Two-Component Regulatory System of Salmonella enterica Serovar Typhi and Typhimurium

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Jane Hawkey, David J. Edwards, Karolina Dimovski, Lester Hiley, Helen Billman-Jacobe, Geoff Hogg, Kathryn E. Holt

Evidence of microevolution of Salmonella Typhimurium during a series of egg-associated outbreaks linked to a single chicken farm

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Mohammad Hamidian, Kathryn E. Holt

, Derek Pickard, Gordon Dougan, Ruth M. Hall

A GC1 Acinetobacter baumannii isolate carrying AbaR3 and the aminoglycoside resistance transposon TnaphA6 in a conjugative plasmid

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Kathryn E. Holt

, Tran Vu Thieu Nga, Tran Vu Thieu Nga, Duy Pham Thanh, Ha Vinh, Dong Wook Kim, My Phan Vu Tra, Nguyen Van Minh Hoang, James I. Campbell, Nguyen Van Minh Hoang, Nguyen Thanh Vinh, Pham Van Minh, My Phan Vu Tra, Cao Thu Thuy, Tran Thi Thu Nga and 20 other authors

Tracking the establishment of local endemic populations of an emergent enteric pathogen

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Mohammad Hamidian, Matthew Wynn, Kathryn E. Holt

, Derek Pickard, Gordon Dougan, Ruth M. Hall

Identification of a marker for two lineages within the GC1 clone of Acinetobacter baumannii

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Robert A. Kingsley

, Sally Kay, Thomas Richard Connor, Lars Barquist

, Leanne Sait, Kathryn E. Holt

, Karthi Sivaraman, Thomas Wileman, David Goulding, Simon Clare, Christine Hale, Aswin Seshasayee, Simon Harris, Nicholas R. Thomson, Paul P. Gardner and 6 other authors

Genome and Transcriptome Adaptation Accompanying Emergence of the Definitive Type 2 Host-Restricted Salmonella enterica Serovar Typhimurium Pathovar

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