Papers authored by David I. Heiman
Refreshing results…
2018
Joel Saltz,
Rajarsi Gupta,
Le Hou,
Tahsin Kurc,
Pankaj Singh,
Vu Nguyen,
Dimitris Samaras,
Kenneth R. Shroyer,
Tianhao Zhao,
Rebecca Batiste,
John Van Arnam,
Ilya Shmulevich,
Arvind U. K. Rao,
Alexander J. Lazar,
Ashish Sharma
and 724 other authors
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Vésteinn Thorsson,
David L. Gibbs,
Scott D. Brown,
Denise Wolf,
Dante S. Bortone,
Tai-Hsien Ou Yang,
Eduard Porta-Pardo,
Galen F. Gao,
Christopher L. Plaisier,
James A. Eddy,
Elad Ziv,
Aedin C. Culhane,
Evan O. Paull,
I. K. Ashok Sivakumar,
Andrew J. Gentles
and 752 other authors
The Immune Landscape of Cancer
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Michael Seiler,
Shouyong Peng,
Anant A. Agrawal,
James Palacino,
Teng Teng,
Ping Zhu,
Peter G. Smith,
Silvia Buonamici,
Lihua Yu,
Samantha J. Caesar-Johnson,
John A. Demchok,
Ina Felau,
Melpomeni Kasapi,
Martin L. Ferguson,
Carolyn M. Hutter
and 719 other authors
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Jiexin J. Zhang,
M. H. Bailey,
W. Zhang,
Collin Tokheim,
Eduard Porta-Pardo,
Sohini Sengupta,
Denis Bertrand,
Amila Weerasinghe,
Antonio Colaprico,
Michael C. Wendl,
Jaegil Kim,
Brendan Reardon,
Patrick Kwok-Shing Ng,
Kang Jin Jeong,
Song Cao
and 767 other authors
Comprehensive Characterization of Cancer Driver Genes and Mutations
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William Y. Kim,
Lixing Yang,
Christopher J. Ricketts,
Aguirre A. De Cubas,
Yussanne,
Huihui Fan,
Christof C. Smith,
Martin Lang,
Ed Reznik,
Liming X. Yang,
Ewan A. Gibb,
Reanne Bowlby,
Donald P. Bottaro,
Rehan Akbani,
Toni K. Choueiri
and 776 other authors
The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma
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Kuan-Lin Huang,
R. Jay Mashl,
Yige Wu,
Deborah I. Ritter,
Jiayin Wang,
Clara Oh,
Marta Paczkowska,
Sheila Reynolds,
Matthew A. Wyczalkowski 
,
Ninad Oak,
Adam D. Scott,
Michal Krassowski,
Andrew D. Cherniack,
Kathleen E. Houlahan,
Reyka Jayasinghe
and 748 other authors
,
Ninad Oak,
Adam D. Scott,
Michal Krassowski,
Andrew D. Cherniack,
Kathleen E. Houlahan,
Reyka Jayasinghe
and 748 other authors
Pathogenic Germline Variants in 10,389 Adult Cancers
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Li Ding,
Matthew H. Bailey,
Eduard Porta-Pardo,
Vesteinn Thorsson,
Antonio Colaprico,
Denis Bertrand,
David L. Gibbs,
Amila Weerasinghe,
Kuan-Lin Huang,
Collin Tokheim,
Isidro Cortés-Ciriano ,
Reyka Jayasinghe,
Feng Chen,
Lihua Yu,
Sam Sun
and 732 other authors
,
Reyka Jayasinghe,
Feng Chen,
Lihua Yu,
Sam Sun
and 732 other authors
Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics
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Hua-Sheng Chiu,
Sonal Somvanshi,
Ektaben Patel,
Ting-Wen Chen,
Vivek P. Singh,
Barry Zorman,
Sagar L. Patil ,
Yinghong Pan ,
Sujash S. Chatterjee,
Preethi H. Gunaratne,
Anil K. Sood,
Pavel Sumazin,
Samantha J. Caesar-Johnson,
John A. Demchok,
Ina Felau
and 737 other authors
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,
Yinghong Pan ,
Sujash S. Chatterjee,
Preethi H. Gunaratne,
Anil K. Sood,
Pavel Sumazin,
Samantha J. Caesar-Johnson,
John A. Demchok,
Ina Felau
and 737 other authors
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Theo A. Knijnenburg,
Linghua Wang,
Michael T. Zimmermann,
Nyasha Chambwe ,
Galen F. Gao,
Andrew D. Cherniack,
Huihui Fan ,
Hui Shen,
Gregory P. Way,
Casey S. Greene,
Yuexin Liu,
Rehan Akbani,
Bin Feng,
Lawrence A. Donehower,
Chase Miller
and 730 other authors
,
Galen F. Gao,
Andrew D. Cherniack,
Huihui Fan ,
Hui Shen,
Gregory P. Way,
Casey S. Greene,
Yuexin Liu,
Rehan Akbani,
Bin Feng,
Lawrence A. Donehower,
Chase Miller
and 730 other authors
Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas
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Gregory P. Way,
Francisco Sanchez-Vega ,
Konnor La,
Joshua Armenia,
Walid K. Chatila,
Augustin Luna,
Chris Sander,
Andrew D. Cherniack,
Marco Mina,
Giovanni Ciriello,
Nikolaus Schultz,
Yolanda Sanchez,
Casey S. Greene,
Samantha J. Caesar-Johnson,
John A. Demchok
and 715 other authors
,
Konnor La,
Joshua Armenia,
Walid K. Chatila,
Augustin Luna,
Chris Sander,
Andrew D. Cherniack,
Marco Mina,
Giovanni Ciriello,
Nikolaus Schultz,
Yolanda Sanchez,
Casey S. Greene,
Samantha J. Caesar-Johnson,
John A. Demchok
and 715 other authors
Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas
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Yang Liu,
Nilay S. Sethi,
Toshinori Hinoue,
Barbara G. Schneider,
Andrew D. Cherniack,
Francisco Sanchez-Vega ,
Jose A. Seoane,
Farshad Farshidfar,
Reanne Bowlby,
Mirazul Islam,
Jaegil Kim,
Walid Chatila,
Rehan Akbani,
Rupa S. Kanchi,
Charles S. Rabkin
and 728 other authors
,
Jose A. Seoane,
Farshad Farshidfar,
Reanne Bowlby,
Mirazul Islam,
Jaegil Kim,
Walid Chatila,
Rehan Akbani,
Rupa S. Kanchi,
Charles S. Rabkin
and 728 other authors
Comparative Molecular Analysis of Gastrointestinal Adenocarcinomas
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Reyka G. Jayasinghe,
Song Cao,
Qingsong Gao,
Michael C. Wendl,
Nam Sy Vo,
Sheila M. Reynolds,
Yanyan Zhao,
Héctor Climente-González,
Shengjie Chai,
Fang Wang,
Rajees Varghese,
Mo Huang,
Wen-Wei Liang,
Matthew A. Wyczalkowski,
Sohini Sengupta
and 734 other authors
Systematic Analysis of Splice-Site-Creating Mutations in Cancer
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Qingsong Gao,
Wen-Wei Liang,
Steven M. Foltz ,
Gnanavel Mutharasu,
Reyka G. Jayasinghe,
Song Cao,
Wen-Wei Liao,
Sheila M. Reynolds,
Matthew A. Wyczalkowski ,
Lijun Yao,
Lihua Yu,
Sam Q. Sun,
Ken Chen,
Alexander J. Lazar,
Ryan C. Fields
and 729 other authors
,
Gnanavel Mutharasu,
Reyka G. Jayasinghe,
Song Cao,
Wen-Wei Liao,
Sheila M. Reynolds,
Matthew A. Wyczalkowski ,
Lijun Yao,
Lihua Yu,
Sam Q. Sun,
Ken Chen,
Alexander J. Lazar,
Ryan C. Fields
and 729 other authors
Driver Fusions and Their Implications in the Development and Treatment of Human Cancers
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Zhongqi Ge,
Jake S. Leighton,
Yumeng Wang,
Xinxin Peng ,
Zhongyuan Chen,
Hu Chen,
Yutong Sun,
Fan Yao,
Jun Li,
Huiwen Zhang,
Jianfang Liu,
Craig D. Shriver,
Hai Hu,
Helen Piwnica-Worms,
Li Ma
and 722 other authors
,
Zhongyuan Chen,
Hu Chen,
Yutong Sun,
Fan Yao,
Jun Li,
Huiwen Zhang,
Jianfang Liu,
Craig D. Shriver,
Hai Hu,
Helen Piwnica-Worms,
Li Ma
and 722 other authors
Integrated Genomic Analysis of the Ubiquitin Pathway across Cancer Types
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Joshua D. Campbell,
Christina Yau,
Yuexin Liu,
Reanne Bowlby,
Huihui Fan ,
Kevin Brennan,
Alison M. Taylor,
Chen Wang,
Lauren Averett Byers,
Rehan Akbani,
Vonn Walter,
Chad J. Creighton,
Cristian Coarfa,
Juliann Shih,
Andrew D. Cherniack
and 745 other authors
,
Kevin Brennan,
Alison M. Taylor,
Chen Wang,
Lauren Averett Byers,
Rehan Akbani,
Vonn Walter,
Chad J. Creighton,
Cristian Coarfa,
Juliann Shih,
Andrew D. Cherniack
and 745 other authors
Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas
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Francisco Sanchez-Vega ,
Marco Mina,
Joshua Armenia,
Walid K. Chatila,
Augustin Luna,
Konnor C. La,
Sofia Dimitriadoy,
David L. Liu,
Havish S. Kantheti,
Sadegh Saghafinia,
Debyani Chakravarty,
Foysal Daian,
Qingsong Gao,
Matthew H. Bailey,
Wen-Wei Liang
and 742 other authors
,
Marco Mina,
Joshua Armenia,
Walid K. Chatila,
Augustin Luna,
Konnor C. La,
Sofia Dimitriadoy,
David L. Liu,
Havish S. Kantheti,
Sadegh Saghafinia,
Debyani Chakravarty,
Foysal Daian,
Qingsong Gao,
Matthew H. Bailey,
Wen-Wei Liang
and 742 other authors
Oncogenic Signaling Pathways in The Cancer Genome Atlas
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Han Chen,
Chunyan Li,
Xinxin Peng ,
Zhicheng Zhou,
John N. Weinstein,
Han Liang,
Samantha J. Caesar-Johnson,
John A. Demchok,
Ina Felau,
Melpomeni Kasapi,
Martin L. Ferguson,
Carolyn M. Hutter,
Heidi J. Sofia,
Roy Tarnuzzer,
Zhining Wang
and 714 other authors
,
Zhicheng Zhou,
John N. Weinstein,
Han Liang,
Samantha J. Caesar-Johnson,
John A. Demchok,
Ina Felau,
Melpomeni Kasapi,
Martin L. Ferguson,
Carolyn M. Hutter,
Heidi J. Sofia,
Roy Tarnuzzer,
Zhining Wang
and 714 other authors
A Pan-Cancer Analysis of Enhancer Expression in Nearly 9000 Patient Samples
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Franz X. Schaub,
Varsha Dhankani,
Ashton C. Berger,
Mihir Trivedi,
Anne B. Richardson ,
Reid Shaw,
Wei Zhao,
Xiaoyang Zhang,
Andrea Ventura,
Yuexin Liu,
Donald E. Ayer ,
Peter J. Hurlin,
Andrew D. Cherniack,
Robert N. Eisenman,
Brady Bernard
and 721 other authors
,
Reid Shaw,
Wei Zhao,
Xiaoyang Zhang,
Andrea Ventura,
Yuexin Liu,
Donald E. Ayer ,
Peter J. Hurlin,
Andrew D. Cherniack,
Robert N. Eisenman,
Brady Bernard
and 721 other authors
Pan-cancer Alterations of the MYC Oncogene and Its Proximal Network across the Cancer Genome Atlas
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Kyle Ellrott ,
Matthew H. Bailey,
Gordon Saksena,
Kyle R. Covington,
Cyriac Kandoth,
Chip Stewart,
Julian Hess,
Singer Ma,
Kami E. Chiotti,
Michael McLellan,
Heidi J. Sofia,
Carolyn Hutter,
Gad Getz,
David Wheeler,
Li Ding
and 719 other authors
,
Matthew H. Bailey,
Gordon Saksena,
Kyle R. Covington,
Cyriac Kandoth,
Chip Stewart,
Julian Hess,
Singer Ma,
Kami E. Chiotti,
Michael McLellan,
Heidi J. Sofia,
Carolyn Hutter,
Gad Getz,
David Wheeler,
Li Ding
and 719 other authors
Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines
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