Kate Baker - Dissemin

Papers authored by Kate Baker

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2022 Vincenzo Torraca, Dominik Brokatzky, Sydney L. Miles, Charlotte E. Chong, P. Malaka De Silva, Stephen Baker, Claire Jenkins, Kathryn E. Holt, Kate S. Baker

, Serge Mostowy

Shigellaserotypes associated with carriage in humans establish persistent infection in zebrafish

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This paper is made freely available by the publisher.

Taj Azarian, Norelle L. Sherry, Kate Baker

, Kathryn E. Holt, Iruka N. Okeke

Making microbial genomics work for clinical and public health microbiology

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Rebecca Bengtsson, Kate Baker

, Andrew Cunningham, David Greig, Shinto John, Shaheed Macgregor, Katharina Seilern-Moy, Simon Spiro, Charlotte Chong, Malaka De Silva, Claire Jenkins, Becki Lawson

The genomic epidemiology of Escherichia albertii

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P. Malaka De Silva

, George E. Stenhouse, Grace A. Blackwell, Rebecca J. Bengtsson, Claire Jenkins, James P. J. Hall

, Kate S. Baker

A tale of two plasmids: contributions of plasmid associated phenotypes to epidemiological success among Shigella

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Rebecca J. Bengtsson, Adam J. Simpkin, Caisey V. Pulford, Ross Low, David A. Rasko

, Daniel J. Rigden, Neil Hall, Eileen M. Barry

, Sharon M. Tennant, Kate S. Baker

Pathogenomic analyses of Shigella isolates inform factors limiting shigellosis prevention and control across LMICs

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2021 Rebecca J. Bengtsson, Adam J. Simpkin, Caisey V. Pulford, Ross Low

, David A. Rasko, Daniel J. Rigden, Neil Hall, Eileen M. Barry, Sharon M. Tennant, Kate S. Baker

Informing shigellosis prevention and control through pathogen genomics

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Rebecca J. Bengtsson, Timothy J. Dallman, Hester Allen, P. Malaka De Silva, George Stenhouse, Caisey V. Pulford, Rebecca J. Bennett, Claire Jenkins, Kate S. Baker

Accessory Genome Dynamics and Structural Variation of Shigella from Persistent Infections

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2020 Caisey V. Pulford

, Blanca M. Perez-Sepulveda, Rocío Canals

, Jessica A. Bevington

, Rebecca J. Bengtsson, Nicolas Wenner, Ella V. Rodwell, Benjamin Kumwenda

, Xiaojun Zhu

, Rebecca J. Bennett

, George E. Stenhouse

, P. Malaka De Silva, Hermione J. Webster, Jose A. Bengoechea

, Amy Dumigan

and 16 other authors

Stepwise evolution of Salmonella Typhimurium ST313 causing bloodstream infection in Africa

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Jane Hawkey, Kalani Paranagama, Kate S. Baker

, Rebecca J. Bengtsson, François-Xavier Weill, Nicholas R. Thomson, Stephen Baker, Louise Cerdeira, Zamin Iqbal, Martin Hunt, Danielle J. Ingle, Timothy J. Dallman, Claire Jenkins, Deborah A. Williamson, Kathryn E. Holt

Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen,Shigella sonnei

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This paper was not found in any repository, but could be made available legally by the author.

Kate S. Baker

Microbe hunting in the modern era: reflecting on a decade of microbial genomic epidemiology

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2019 Carlo Bianco, Kate S. Baker

, Luca Pazzini, Alessandra Cafiso, Richard D. Suu-Ire, Andrew A. Cunningham, James L. N. Wood, Alejandro Nuñez

Demodicosis in a captive African straw-coloured fruit bat (Eidolon helvum)

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Rebecca J. Bennett, Kate S. Baker

Looking Backward To Move Forward: the Utility of Sequencing Historical Bacterial Genomes

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2018 Jennifer Barr

, Shawn Todd, Gary Crameri, Adam Foord, Glenn Marsh

, Leah Frazer, Jean Payne, Jenni Harper, Kate S. Baker

, Andrew A. Cunningham

, James L. N. Wood

, Deborah Middleton, Lin-Fa Wang

Animal infection studies of two recently discovered African bat paramyxoviruses, Achimota 1 and Achimota 2

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Adi Behar, Kate Susan Baker

, Ravit Bassal, Analia Ezernitchi, Lea Valinsky, Nicholas R. Thomson, Daniel Cohen

Microevolution and Patterns of Transmission ofShigella sonneiwithin Cyclic Outbreaks Shigellosis, Israel

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Kate S. Baker

, Timothy J. Dallman, Nicholas R. Thomson, Claire Jenkins

An outbreak of a rare Shiga-toxin-producing Escherichia coli serotype (O117:H7) among men who have sex with men

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David T. S. Hayman

, Angela D. Luis, Olivier Restif, Kate S. Baker

, Anthony R. Fooks, Clint Leach, Daniel L. Horton, Richard Suu-Ire, Andrew A. Cunningham, James L. N. Wood, Colleen T. Webb

Maternal antibody and the maintenance of a lyssavirus in populations of seasonally breeding African bats

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Kate S. Baker

, Timothy J. Dallman, Nigel Field, Tristan Childs, Holly Mitchell, Martin Day, François-Xavier Weill, Sophie Lefèvre, Mathieu Tourdjman, Gwenda Hughes, Claire Jenkins, Nicholas Thomson

Genomic epidemiology of Shigella in the United Kingdom shows transmission of pathogen sublineages and determinants of antimicrobial resistance

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Kate S. Baker

, Timothy J. Dallman, Nigel Field, Tristan Childs, Holly Mitchell, Martin Day, François-Xavier Weill, Sophie Lefèvre, Mathieu Tourdjman, Gwenda Hughes, Claire Jenkins, Nicholas Thomson

Horizontal antimicrobial resistance transfer drives epidemics of multiple Shigella species

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Alison J. Peel

, Kate S. Baker

, David T. S. Hayman

, Christopher C. Broder, Andrew A. Cunningham

, Anthony R. Fooks, Romain Garnier, James L. N. Wood

, Olivier Restif

Support for viral persistence in bats from age-specific serology and models of maternal immunity

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Papers authored by Kate Baker