Ecosystem-based management advocates that forestry disturbances should aim to emulate natural disturbances to mitigate the landscape-level impact of forest management. This study compares the impact of clear-cuts followed by a prescribed burn (CCPB) with clear-cuts alone (CC) and current careful logging practices (CLAAG: “careful logging around advanced growth”) on understory composition within black spruce (Picea mariana Miller (BSP)) paludified forest stands at the plot, site, and treatment levels using a functional-type approach. Vascular and nonvascular taxa showed significant differences in composition at the plot level among treatments. We found that pioneer taxa occurred mainly in CCPB sites, while late-successional taxa characterized CC sites. CLAAG sites had higher taxa richness than CCPB and CC sites, and we found that CCPB treatments were most likely to promote vascular taxa compositions that are more similar to those observed after natural disturbances. Additionally, the relative abundance of Sphagnum spp., responsible for paludification, was significantly reduced in sites treated by prescribed burning. This study therefore presents results suggesting that prescribed burning might represent a sustainable alternative to current harvesting techniques in the Clay Belt of eastern Canada that could help in preserving biodiversity (in terms of understory species assemblage) while maintaining or even enhancing forest productivity.