Published in

National Academy of Sciences, Proceedings of the National Academy of Sciences, 35(107), p. 15329-15334, 2010

DOI: 10.1073/pnas.1006447107

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New strategy for the synthesis of chemically modified RNA constructs exemplified by hairpin and hammerhead ribozymes

Journal article published in 2010 by Afaf H. El-Sagheer, Tom Brown ORCID
This paper is made freely available by the publisher.
This paper is made freely available by the publisher.

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Abstract

The CuAAC reaction (click chemistry) has been used in conjunction with solid-phase synthesis to produce catalytically active hairpin ribozymes around 100 nucleotides in length. Cross-strand ligation through neighboring nucleobases was successful in covalently linking presynthesized RNA strands with high efficiency ( trans -ligation). In an alternative strategy, intrastrand click ligation was employed to produce a functional hammerhead ribozyme containing a novel nucleic acid backbone mimic at the catalytic site ( cis -ligation). The ability to synthesize long RNA strands by a combination of solid-phase synthesis and click ligation is an important addition to RNA chemistry. It is compatible with a plethora of site-specific modifications and is applicable to the synthesis of many biologically important RNA molecules.