Additional file 11. CGIs lose mC upon Setdb1 depletion. Figure shows all the CGIs on the X chromosome that significantly lose mC upon Setdb1 depletion in Female MEFs, when each individual CpG within the CGI is considered. The number of SNPs analysed within each CGI is indicated (n), as is the p-value (p). Mean +s.e.m. Studentâ s two-tailed t-test. Note that scales are different on all graphs.