Additional file 1: Table S1. of Population whole-genome bisulfite sequencing across two tissues highlights the environment as the principal source of human methylome variation

Busche, Stephan; Shao, Xiaojian; Caron, Maxime; Kwan, Tony; Allum, Fiona; Cheung, Warren; Ge, Bing; Westfall, Susan; Simon, Marie-Michelle; Barrett, Amy; Bell, Jordana; McCarthy, Mark; Deloukas, Panos; Blanchette, Mathieu; Bourque, Guillaume; Spector, Timothy; Lathrop, Mark; Pastinen, Tomi; Grundberg, Elin

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Additional file 1: Table S1. of Population whole-genome bisulfite sequencing across two tissues highlights the environment as the principal source of human methylome variation

Published in 2015 by Stephan Busche, Xiaojian Shao, Maxime Caron, Tony Kwan, Fiona Allum, Warren Cheung, Bing Ge, Susan Westfall, Marie-Michelle Simon, Amy Barrett, Jordana Bell, Mark McCarthy, Panos Deloukas, Mathieu Blanchette, Guillaume Bourque and other authors.

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Abstract

Sequencing statistics summary. Table S2. Genome feature association of filtered variant-removed CpGs for adipose and blood. Table S3. Characteristics of unmethylated (UMR) and low-methylated regions (LMR) in adipose and blood. Table S4. Number of invariable sites in filtered datasets at various minimum coverages. Table S5. pDMR statistics in adipose and blood. Table S6. Result of the TFBS motif analysis using the HOMER software. Table S7. MZ2 vs. MZ3-derived significant DMCs overlapping known smoking methylation loci. Table S8. Genetic and non-genetic effect of CpG methylation. Table S9. Overall detected CpH methylation per tissue and strand. (XLSX 56 kb)