Monitoring river plume dynamics and variations in complex coastal areas can provide useful information to prevent marine environmental damage. In this work, the Robust Satellite Techniques (RST) approach has been implemented and tested on historical series of Aqua Moderate Resolution Imaging Spectroradiometer (MODIS) data to monitor, for the first time, Suspended Particulate Matter (SPM) anomalies associated to river plumes. To this aim, MODIS-Aqua Level 1A data were processed using an atmospheric correction adequate for coastal waters, and SPM daily maps were generated applying an algorithm adapted from literature. The RST approach was then applied to these maps to assess the anomalous presence of SPM. The study area involves the Basilicata region coastal waters (Ionian Sea, South of Italy). A long-time analysis (2003–2015) conducted for the month of December allows us to find that the maximum SPM concentration value was registered in December 2013, when an extreme hydrological event occurred. A short-time analysis was then carried out applying RST to monitor the dynamics of anomalous SPM concentrations. Finally, the most exposed areas, in terms of SPM concentration, were identified. The results obtained in this work showed the RST high potential when used in combination with standard SPM daily maps to better characterize and monitor coastal waters.