Genome-wide characterization of Italian ovine biodiversity

Ciani, E.; Sarti, F. M.; Napolitano, F.; Carta, A.; Matassino, D.; Crepaldi, P.; Ciampolini, R.; Bordonaro, S.; Modesto, P.; Macciotta, N.; Ajmone Marsan, P.; Portolano, B.; Pilla, F.

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Genome-wide characterization of Italian ovine biodiversity

Proceedings article published in 2012 by E. Ciani, F. M. Sarti, F. Napolitano, A. Carta, D. Matassino, P. Crepaldi, R. Ciampolini, S. Bordonaro, P. Modesto, N. Macciotta, P. Ajmone Marsan, B. Portolano, F. Pilla

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Abstract

Genome-wide SNP panels provide an affordable tool to assess within-breed genetic diversity and between breed relationships, also among closely related populations. A set of 496 animals, representative of 20 local and cosmopolite sheep breeds from different geographic and agro-ecological areas of Italy were genotyped with the Illumina Ovine SNP50 BeadChip. On average, 97% of the loci were polymorphic within breed, with slight differences among breeds. SNP with MAF