Published in

International Union of Crystallography, Acta Crystallographica Section D: Biological Crystallography, 4(66), p. 470-478, 2010

DOI: 10.1107/s090744490903947x

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Recent developments in classical density modification

Journal article published in 2010 by Kevin Cowtan ORCID
This paper is made freely available by the publisher.
This paper is made freely available by the publisher.

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Abstract

Classical density-modification techniques (as opposed to statistical approaches) offer a computationally cheap method for improving phase estimates in order to provide a good electron-density map for model building. The rise of statistical methods has lead to a shift in focus away from the classical approaches; as a result, some recent developments have not made their way into classical density-modification software. This paper describes the application of some recent techniques, including most importantly the use of prior phase information in the likelihood estimation of phase errors within a classical density-modification framework. The resulting software gives significantly better results than comparable classical methods, while remaining nearly two orders of magnitude faster than statistical methods.