Electron clouds and gas pressure rise limit the performance of many major accelerators. A multi-laboratory effort to understand the underlying physics via the combined application of experiment, theory, and simulation is underway. We present here the status of the simulation capability development, based on a merge of the three-dimensional parallel Particle-In-Cell (PIC) accelerator code WARP and the electron cloud code POSINST, with additional functionalities. The development of the new capability follows a ''roadmap'' describing the different functional modules, and their inter-relationships, that are ultimately needed to reach self-consistency. Newly developed functionalities include a novel particle mover bridging the time scales between electron and ion motion, a module to generate neutrals desorbed by beam ion impacts at the wall, and a module to track impact ionization of the gas by beam ions or electrons. Example applications of the new capability to the modeling of electron effects in the High Current Experiment (HCX) are given.