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International Union of Crystallography, Acta Crystallographica Section B: Structural Science, 1(55), p. 55-69, 1999

DOI: 10.1107/s0108768198006557

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Crystal and molecular structures of diazapyrenes and a study of π⋯π interactions

Journal article published in 1999 by Rudolf Kiralj, Biserka Kojić-Prodić, Ivo Piantanida ORCID, Mladen Žinić
This paper is made freely available by the publisher.
This paper is made freely available by the publisher.

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Abstract

Two diazapyrenes, 5,10-dimethyl-4,9-diazapyrene (1) and novel 2,7-dimethyl-4,9-diazapyrene (2) have been synthesized. Their crystal structures are reported here and are the first representatives of diazapyrenes. Crystal data: (1) monoclinic, P21/c, a = 4.0246 (5), b = 15.5147 (5), c = 9.1453 (9) Å, β = 101.23 (1)°, V = 560.1 (1) Å3, Z = 2, R = 0.043; (2) monoclinic, C2/m, a = 12.4968 (3), b = 11.4751 (4), c = 3.9615 (5) Å, β = 96.80 (1)°, V = 564.09 (5) Å3, Z = 2, R = 0.0405. The experimental bond lengths are compared with those calculated by molecular mechanics (MM3), semi-empirical methods (MOPAC6.0-PM3, AM1, MNDO) and values predicted by valence-bond and variable-electronegativity self-consistent field (VESCF) methods. π⋯π interactions in (1), (2) and seventeen other pyrene and pyrene-like molecules selected from the Cambridge Structural Database [Allen & Kennard (1993). Chem. Des. Autom. News, 8, 131–137] have been studied. The following quantitative parameters of π⋯π interactions have been calculated: the shortest crystallographic axis, the offset parameter, the interplanar angle, the interactive volume and the overlapping surfaces. They are used for the classification of crystal-packing motifs; a high predominance of β and a few cases of γ and sandwich-herringbone types are observed. In addition, electronegativity, the sum of partial atomic charges of the ring non-H atoms and the number of aromatic skeleton electrons are used as parameters for classification. MOPAC-PM3 was used to calculate the partial atomic charges in (1), (2) and pyrene analogues. Correlations between geometrical and electronic structure parameters reveal an analogy between the β-type structures and the crystal structure of graphite.