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American Chemical Society, Journal of the American Chemical Society, 16(136), p. 5949-5955, 2014

DOI: 10.1021/ja412379p

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A Single Molecule Perspective on the Functional Diversity ofin VitroEvolved β-Glucuronidase

Journal article published in 2014 by Raphaela B. Liebherr, Max Renner, Hans H. Gorris ORCID
This paper is made freely available by the publisher.
This paper is made freely available by the publisher.

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Abstract

The mechanisms that drive the evolution of new enzyme activities have been investigated by comparing the kinetics of wildtype and in vitro evolved β-glucuronidase (GUS) at the single molecule level. Several hundred single GUS molecules were separated in large arrays of 62 500 ultrasmall reaction chambers etched into the surface of a fused silica slide to observe their individual substrate turnover rates in parallel by fluorescence microscopy. Individual GUS molecules feature long-lived but divergent activity states, and their mean activity is consistent with classic Michaelis-Menten kinetics. The large number of single molecule substrate turnover rates is representative of the activity distribution within an entire enzyme population. Partially evolved GUS displays a much broader activity distribution among individual enzyme molecules than wildtype GUS. The broader activity distribution indicates a functional division of work between individual molecules in a population of partially evolved enzymes that - as so-called generalists - are characterized by their promiscuous activity with many different substrates.