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Supplementary Material 2

This paper was not found in any repository; the policy of its publisher is unknown or unclear.
This paper was not found in any repository; the policy of its publisher is unknown or unclear.

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Abstract

Minimum amino acid identity of the novel rodent to prototype hepaciviruses. [1] Rhabdomys pumilio clade 1 hepacivirus: SAR46 (KC411807); SAR3 (KC411806) [2] Myodes glareolus clade 1 hepacivirus: RMU10-3382 (KC411777); NLR-365, KC411796 [3] Myodes glareolus clade 2 hepacivirus: NLR-AP70 (KC411784) HCV: HCV-1a (NC_004102), HCV-2a (AB047639), HCV3a (X76918), HCV-4a (Y11604), HCV-5a (Y13184), HCV-6a (AY859526) and HCV-7 (EF108306); Canine/Equine hepaciviruses CHV (JF744991), NPHV-NZP-1 (JQ434001), NPHV-A6-006 (JQ434003), NPHV-G5-077 (JQ434006), NPHV-B10-022 (JQ434004), NPHV-H10-094 (JQ434007), NPHV-G1-073 (JQ434002), NPHV-H3-011 (JQ434008), NPHV-F8-068 (JQ434005); GBV-B (NC_001655) In italics: Highest identity of any hepacivirus with HCV in matrix (canine/equine clade in all genes). Underlined: Highest identity of any hepacivirus with GBV-B in matrix (a rodent clade in all genes). In bold type: Smallest identity value in matrix. (DOC)