Studies regarding the influence of emergent vegetation on sediment transport are scarce and have mainly focused on flume conditions. To fill this gap and also meet the international need, we aimed to evaluate the influence of emergent vegetation (Echinodorus macrophyllus) on sediment transport of Capibaribe River, Brazil. Bedload and suspended sediment measurements were carried out using the US BLH 84 and US DH 48 samplers, respectively. Measurements of stem diameter, stem spacing and plant density were performed in conjunction with flow and sediment field measurements. Based on our results, 0.45 m s−1 was the threshold of mean flow velocity supported by Echinodorus macrophyllus under field conditions. This value can be helpful for other rivers with gravel-bed river to armoured layer ratio (AR =D50-surface)/D50-subsurface=12.50) – natural conditions observed in Capibaribe River – or where the vegetation can provide positive effects, such as increase the bed stability, assist water restoration/rehabilitation and decrease water turbidity. Our results can hopefully be used in engineering practice and ecosystem management. In general, both the drag coefficient and drag force varied inversely and directly with the mean flow velocity and vegetation density, respectively. The vegetation resistance force was inversely proportional to the bedload transport owing to the resistance caused by emergent vegetation. This finding was supported by the clear decoupling between nonvegetated and emergent vegetated conditions indicated by cluster analysis. The study results provided a reasonable understanding of the interaction between emergent vegetation, water flow and sediment transport in the Capibaribe River.