Dissemin is shutting down on January 1st, 2025

Published in

Elsevier, Journal of Theoretical Biology, 2(264), p. 377-385

DOI: 10.1016/j.jtbi.2010.02.004

Links

Tools

Export citation

Search in Google Scholar

Distributions for negative-feedback-regulated stochastic gene expression: Dimension reduction and numerical solution of the chemical master equation

Journal article published in 2010 by Eduardo S. Zeron, Moisés Santillán ORCID
This paper is available in a repository.
This paper is available in a repository.

Full text: Download

Green circle
Preprint: archiving allowed
Red circle
Postprint: archiving forbidden
Red circle
Published version: archiving forbidden
Data provided by SHERPA/RoMEO

Abstract

In this work we introduce a novel approach to study biochemical noise. It comprises a simplification of the master equation of complex reaction schemes (via an adiabatic approximation) and the numerical solution of the reduced master equation. The accuracy of this procedure is tested by comparing its results with analytic solutions (when available) and with Gillespie stochastic simulations. We further employ our approach to study the stochastic expression of a simple gene network, which is subject to negative feedback regulation at the transcriptional level. Special attention is paid to the influence of negative feedback on the amplitude of intrinsic noise, as well as on the relaxation rate of the system probability distribution function to the steady solution. Our results suggest the existence of an optimal feedback strength that maximizes this relaxation rate.