Nitrogen (N) cycling in boreal peatland ecosystems may be influenced in important ways by freeze-thaw cycles (FTCs). Adsorption and desorption of ammonium ions (NH+4) were examined in a controlled laboratory experiment for soils sampled from palustrine wetland, riverine wetland, and farmland reclaimed from natural wetland in response to the number of FTCs. The results indicate that freeze-thaw significantly increased the adsorption capacity of NH+4 and reduced the desorption potential of NH+4 in the wetland soils. There were significant differences in the NH+4 adsorption amount between the soils with and without freeze-thaw treatment. The adsorption amount of NH+4 increased with increasing FTCs. The palustrine wetland soil had a greater adsorption capacity and a weaker desorption potential of NH+4 than the riverine wetland soil because of the significantly higher clay content and cation exchange capacity (CEC) of the riverine wetland soil. Because of the altered soil physical and chemical properties and hydroperiods, the adsorption capacity of NH+4 was smaller in the farmland soil than in the wetland soils, while the desorption potential of the farmland soil was higher than that of the wetland soils. Thus, wetland reclamation would decrease adsorption capacity and increase desorption potential of NH+4, which could result in N loss from the farmland soil. FTCs might mitigate N loss from soils and reduce the risk of water pollution in downstream ecosystems.