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Oxford University Press (OUP), Bioinformatics, 13(31), p. 2211-2213

DOI: 10.1093/bioinformatics/btv116

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EpiToolKit—a web-based workbench for vaccine design

Journal article published in 2015 by Benjamin Schubert, Hans-Philipp Brachvogel, Christopher Jürges, Oliver Kohlbacher
This paper is made freely available by the publisher.
This paper is made freely available by the publisher.

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Abstract

Summary: EpiToolKit is a virtual workbench for immunological questions with a focus on vaccine design. It offers an array of immunoinformatics tools covering MHC genotyping, epitope and neo-epitope prediction, epitope selection for vaccine design, and epitope assembly. In its recently re-implemented version 2.0, EpiToolKit provides a range of new functionality and for the first time allows combining tools into complex workflows. For inexperienced users it offers simplified interfaces to guide the users through the analysis of complex immunological data sets.