American Chemical Society, Journal of the American Chemical Society, 1(135), p. 98-101, 2012
DOI: 10.1021/ja311331m
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We developed a method to translate DNA sequences into densely functionalized nucleic acids by using T4 DNA ligase to mediate the DNA-templated polymerization of 5'-phosphorylated trinucleotides containing a wide variety of appended functional groups. This polymerization proceeds sequence-specifically along a DNA template and can generate polymers of at least 50 building blocks (150 nucleotides) in length with remarkable efficiency. The re-sulting single-stranded highly modified nucleic acid is a suit-able template for primer extension using Deep Vent (exo-) DNA polymerase, thereby enabling the regeneration of tem-plate DNA. We integrated these capabilities to perform iter-ated cycles of in vitro translation, selection, and template regeneration on libraries of modified nucleic acid polymers.