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Wiley, Environmental Microbiology, 9(5), p. 798-803, 2003

DOI: 10.1046/j.1469-2920.2003.00469.x

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In situ distribution and activity of nitrifying bacteria in freshwater sediment

Journal article published in 2003 by Dorte Altmann, Peter Stief, Rudolf Amann, Dirk de Beer ORCID, Andreas Schramm ORCID
This paper is available in a repository.
This paper is available in a repository.

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Abstract

Nitrification was investigated in a model freshwater sediment by the combined use of microsensors and fluorescence in situ hybridization with rRNA-targeted oligonucleotide probes. In situ nitrification activity was restricted mainly to the upper 2 mm of the sediment and coincided with the maximum abundance of nitrifying bacteria, i.e. 1.5 x 107 cells cm-3 for ammonia-oxidizing Beta-proteobacteria (AOB) and 8.6 x 107 cells cm-3 for Nitrospira-like nitrite-oxidizing bacteria (NOB). Cell numbers of AOB decreased more rapidly with depth than numbers of NOB. For the first time, Nitrospira-like bacteria could be quantified and correlated with in situ nitrite oxidation rates in a sediment. Estimated cell-specific nitrite oxidation rates were 1.2-2.7 fmol NO2- cell-1 h-1.