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Elsevier, Bioorganic and Medicinal Chemistry, 17(18), p. 6389-6397, 2010

DOI: 10.1016/j.bmc.2010.07.005

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Synthesis and properties of triplex-forming oligonucleotides containing 2 '-O-(2-methoxyethyl)-5-(3-aminoprop-1-ynyl)-uridine

This paper is available in a repository.
This paper is available in a repository.

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Abstract

2'-O-(2-Methoxyethyl)-5-(3-aminoprop-1-ynyl)-uridine phosphoramidite (MEPU) has been synthesized from d-ribose and 5-iodouracil and incorporated into triplex-forming oligonucleotides (TFOs) by automated solid-phase oligonucleotide synthesis. The TFOs gave very high triplex stability with their target duplexes as measured by ultraviolet/fluorescence melting and DNase I footprinting. The incorporation of MEPU into TFOs renders them resistant to degradation by serum nucleases.