Recent studies have shown that many early aftershocks are missing in the regular earthquake catalogues immediately following a moderate to large earthquake. An effective way to recover those missing aftershocks is to use existing events as templates to scan through continuous waveforms to detect additional events, also known as the matched filter technique. Here, we use this technique to detect missing early aftershocks within 3 d after the 2010 M L 6.4 Jiashian earthquake in southern Taiwan. Using waveforms of 875 aftershocks listed in the Central Weather Bureau catalogue as templates, we have detected 2307 early aftershocks in the first 3 d following the main shock. The aftershock rate generally follows an Omori's type decay with a logarithmic slope p of ∼0.8. In addition, aftershocks migrated along the northwestward direction with a velocity of ∼6–7 km decade –1 and ∼3–4 km decade –1 in the opposite direction in depth of 0–20 km. Regions with different seismic properties in the vicinity of the main shock hypocentre may affect the locations and migration patterns of the early aftershocks. We also found a spatial anticorrelation between the main shock slip and aftershock hypocentres in first half hour, although aftershocks at later times filled in regions with moderate amount of slips during the main shock.