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American Chemical Society, ACS Nano, 6(7), p. 5207-5214, 2013

DOI: 10.1021/nn4009388

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Fast and Efficient Molecule Detection in Localization-Based Super-Resolution Microscopy by Parallel Adaptive Histogram Equalization

Journal article published in 2013 by Yiming Li, Yuji Ishitsuka, Per Niklas Hedde, G. Ulrich Nienhaus ORCID
This paper is available in a repository.
This paper is available in a repository.

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Abstract

In localization-based super-resolution microscopy, individual fluorescent markers are stochastically photoactivated and subsequently localized within a series of camera frames, yielding a final image with a resolution far beyond the diffraction limit. Yet, before localization can be performed, the sub-regions within the frames where the individual molecules are present have to be identified - often times in the presence of high background. In this work, we address the importance of reliable molecule identification for the quality of the final reconstructed super-resolution image. We present a fast and robust algorithm (a-livePALM) that vastly improves the molecule detection efficiency while minimizing false assignments that can lead to image artifacts.