Oxford University Press (OUP), Bioinformatics, 6(23), p. 771-773
DOI: 10.1093/bioinformatics/btl641
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MOTIVATION: CoCo, ChIP-on-Chip online, is an open-source web application that supports the annotation and curation of regulatory regions and associated target genes discovered in ChIP-on-chip experiments. CoCo integrates ChIP-on-chip results with diverse types of gene expression data (expression profiling, in situ hybridization) and displays them within a genomic context. Regulatory relationships between the transcription factor-bound regions and putative target genes can be stored and expanded throughout different sessions. AVAILABILITY: http://furlonglab.embl.de/methods/tools/coco.