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Wiley, Proteomics, 8(12), p. 1074-1092, 2012

DOI: 10.1002/pmic.201100436

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Advancing the sensitivity of selected reaction monitoring-based targeted quantitative proteomics

Journal article published in 2012 by Tujin Shi, Dian Su, Tao Liu, Keqi Tang, David G. Camp, Wei-Jun Qian, Richard D. Smith ORCID
This paper is available in a repository.
This paper is available in a repository.

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Abstract

Selected reaction monitoring (SRM)—also known as multiple reaction monitoring (MRM)—has emerged as a promising high-throughput targeted protein quantification technology for candidate biomarker verification and systems biology applications. A major bottleneck for current SRM technology, however, is insufficient sensitivity for e.g., detecting low-abundance biomarkers likely present at the low ng/mL to pg/mL range in human blood plasma or serum, or extremely low-abundance signaling proteins in cells or tissues. Herein we review recent advances in methods and technologies, including front-end immunoaffinity depletion, fractionation, selective enrichment of target proteins/peptides including posttranslational modifications (PTMs), as well as advances in MS instrumentation which have significantly enhanced the overall sensitivity of SRM assays and enabled the detection of low-abundance proteins at low to sub- ng/mL level in human blood plasma or serum. General perspectives on the potential of achieving sufficient sensitivity for detection of pg/mL level proteins in plasma are also discussed.