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Oxford University Press (OUP), Bioinformatics, 7(26), p. 979-981

DOI: 10.1093/bioinformatics/btq046

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EBImage—an R package for image processing with applications to cellular phenotypes

Journal article published in 2010 by Gregoire Pau, Florian Fuchs, Oleg Sklyar, Michael Boutros, Wolfgang Huber ORCID
This paper is made freely available by the publisher.
This paper is made freely available by the publisher.

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Abstract

Summary: EBImage provides general purpose functionality for reading, writing, processing and analysis of images. Furthermore, in the context of microscopy-based cellular assays, EBImage offers tools to segment cells and extract quantitative cellular descriptors. This allows the automation of such tasks using the R programming language and use of existing tools in the R environment for signal processing, statistical modeling, machine learning and data visualization.