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Elsevier, Soil Biology and Biochemistry, (72), p. 163-171, 2014

DOI: 10.1016/j.soilbio.2014.01.025

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Measuring the soil-microbial interface: Extraction of extracellular polymeric substances (EPS) from soil biofilms

This paper is available in a repository.
This paper is available in a repository.

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Abstract

Many soil microbes exist in biofilms. These biofilms are typified by variable quantities of extracellular polymeric substances (EPS: predominantly polysaccharides, glycoconjugates, and proteins) and the embedded microbial cells. A method to measure soil-EPS (the biofilm exclusive of microbial cells) has not yet been described. The present work investigates the potential of five extraction methods to estimate changes in soil-EPS content. A rationale for selection of appropriate EPS extraction and methodology is discussed, including the crucial consideration of both intracellular and extracellular contamination.