The application of a variety of structurally different protein phosphatase inhibitors (okadaic acid, acanthifolicin, microcystins, nodularin, tautomycin, calyculin A, cantharidin and endothall) to cut surfaces of soybean cotyledons (Glycine max L.) resulted in the production of isoflavonoid phytoalexins (plant defence compounds). Daidzein was the predominant isoflavonoid produced by soybean cotyledons in response to protein phosphatase inhibitors. In contrast, several isoflavonoid phytoalexins were seen after application of either an elicitor beta-glucan fraction isolated from yeast extract or hepta-(1-->3, 1-->6)-beta-glucoside which is the most potent elicitor-active component isolated from the soybean pathogen Phytophthora megasperma f. sp. glycinea. Isoflavonoid production in response to either protein phosphatase inhibitors or elicitors reached a maximum after 2G-24 h. The addition of protein phosphatase inhibitors to a soybean cell suspension culture induced the expression of phenylalanine ammonia-lyase (PAL), the first enzyme in the isoflavonoid blosynthetic pathway. Induction of PAL activity was blocked by protein synthesis inhibitors, cycloheximide or anisomysin, and largely prevented by a protein kinase inhibitor, K252a. Another common response of plant cells to fungal elicitation, alkalinization of the soybean cell culture media, was induced within minutes in response to protein phosphatase inhibitors and was largely prevented by K252a. These studies suggest a direct role for phosphorylation in activation of plasma membrane ion flux(es), whereas the longer-term effects of protein phosphatase inhibitors on isoflavonoid production and PAL expression could be due to either direct effects of increased protein phosphorylation, or the secondary consequences of other phosphorylation-induced cellular changes. They aiso indicate that protein phosphatase inhibitors are likely to be of general use in investigating mechanisms of plant responses to environmental stimull.