The radar-enhanced GSI (version 3.1) system and the WRF-ARW (version 3.4.1) model were modified to assimilate radar/lightning-proxy reflectivity. First, cloud-to-ground lightning data were converted to reflectivity using a simple assumed relationship between flash density and reflectivity. Next, the reflectivity was used in the cloud analysis of GSI to adjust the cloud/hydrometeors and moisture. Additionally, the radar/lightning-proxy reflectivity was simultaneously converted to a 3D temperature tendency. Finally, the model-calculated temperature tendencies from the explicit microphysics scheme, as well as cumulus parameterization at 3D grid points at which the radar temperature tendency is available, were updated in a forward full-physics step of diabatic digital filter initialization in the WRF-ARW. The WRF-GSI system was tested using a mesoscale convective system that occurred on June 5, 2009, and by assimilating Doppler radar and lightning data, respectively. The forecasted reflectivity with assimilation corresponded more closely to the observed reflectivity than that of the parallel experiment without assimilation, particularly during the first 6 h. After assimilation, the short-range precipitation prediction improved, although the precipitation intensity was stronger than the observed one. In addition, the improvements obtained by assimilating lightning data were worse than those from assimilating radar reflectivity over the first 3 h but improved thereafter.