Published in
Nature Research, Scientific Data, 1(10), 2023
DOI: 10.1038/s41597-023-02502-7
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Whole genomes from bacteria collected at diagnostic units around the world 2020
Journal article published in 2023 by
Sidsel Nag 
,
Gunhild Larsen,
Judit Szarvas ,
Laura Elmlund Kohl Birkedahl,
Gábor Máté Gulyás,
Wojchiech Jakub Ciok,
Timmie Mikkel Lagermann,
Silva Tafaj ,
Susan Bradbury,
Peter Collignon,
Denise Daley,
Victorien Dougnon,
Kafayath Fabiyi,
Boubacar Coulibaly,
René Dembélé
and other authors.
,
Gunhild Larsen,
Judit Szarvas ,
Laura Elmlund Kohl Birkedahl,
Gábor Máté Gulyás,
Wojchiech Jakub Ciok,
Timmie Mikkel Lagermann,
Silva Tafaj ,
Susan Bradbury,
Peter Collignon,
Denise Daley,
Victorien Dougnon,
Kafayath Fabiyi,
Boubacar Coulibaly,
René Dembélé
and other authors.
This paper is made freely available by the publisher.
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Abstract
AbstractThe Two Weeks in the World research project has resulted in a dataset of 3087 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units in 35 countries around the world during 2020. A relational database is available with metadata and summary data from selected bioinformatic analysis, such as species prediction and identification of acquired resistance genes.