AbstractWithin the European‐funded Coordination and Support Action MicrobiomeSupport (https://www.microbiomesupport.eu/), the Workshop ‘Education in Food Systems Microbiome Related Sciences: Needs for Universities, Industry and Public Health Systems’ brought together over 70 researchers, public health and industry partners from all over the world to work on elaborating microbiome‐related educational needs in food systems. This publication provides a summary of discussions held during and after the workshop and the resulting recommendations.