Abstract A kinematic misalignment of the stellar and gas components is a phenomenon observed in a significant fraction of galaxies. However, the underlying physical mechanisms are not well understood. A commonly proposed scenario for the formation of a misaligned component requires any preexisting gas disk to be removed, via flybys or ejective feedback from an active galactic nucleus. In this Letter, we study the evolution of a Milky Way mass galaxy in the FIREbox cosmological volume that displays a thin, counterrotating gas disk with respect to its stellar component at low redshift. In contrast to scenarios involving gas ejection, we find that preexisting gas is mainly removed via the conversion into stars in a central starburst, triggered by a merging satellite galaxy. The newly accreted, counterrotating gas eventually settles into a kinematically misaligned disk. About 4% (8 out of 182) of FIREbox galaxies with stellar masses larger than 5 × 10⁹ M _⊙ at z = 0 exhibit gas–star kinematic misalignment. In all cases, we identify central starburst-driven depletion as the main reason for the removal of the preexisting corotating gas component, with no need for feedback from, e.g., a central active black hole. However, during the starburst, the gas is funneled toward the central regions, likely enhancing black hole activity. By comparing the fraction of misaligned discs between FIREbox and other simulations and observations, we conclude that this channel might have a non-negligible role in inducing kinematic misalignment in galaxies.