Low-intensity burnings could be an effective silvicultural tool to prevent the occurrence and severity of wildfires. Nevertheless, their use as a forest fuel reduction tool may have a negative impact on soil properties. The aim of this investigation was to study the impact of a low-intensity prescribed fire on the main chemical properties of the soil (pH, electrical conductivity, and total organic carbon), and the diversity and composition of the soil bacterial communities in a semi-arid forest in SE Spain. Two similar stands were treated with a low-intensity prescribed burn in spring and autumn 2018 and were compared to an unburned stand. All soil samples were collected at the same time (autumn 2018). The chemical properties of the soil showed no significant differences between the prescribed burns and the control forest. Shannon and Pielou’s diversity indices presented values significantly lower in the burned soils compared to the control. Prescribed burning did not modify soil bacterial community structure at the phylum level, but NMDS analysis did reveal a difference between soil bacterial communities at the genus level. Both prescribed burnings favoured some bacterial taxa over others, suggesting different thermal and bacterial resistance. The presence of Massilia, Pseudomonas and Arthrobacter could suggest a short-term ecosystem recovery. Therefore, prescribed burning in semi-arid forests could be suitable as a preventive tool against wildfires.