Dissemin is shutting down on January 1st, 2025

Published in

Nature Research, Nature Microbiology, 8(7), p. 1161-1179, 2022

DOI: 10.1038/s41564-022-01143-7

Links

Tools

Export citation

Search in Google Scholar

SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway

Journal article published in 2022 by Thushan de Silva, Louis du Plessis, Daniela de Angelis, Leonardo de Oliveira Martins, Thushan I. de Silva, Sam Scott, Brian J. Willett ORCID, M. Azim Ansari, Arvind H. Patel, Joe Grove, Eleanor Barnes, Sandra Adele, Barbara Kronsteiner, Sam M. Murray, Oscar A. MacLean and other authors.
This paper is made freely available by the publisher.
This paper is made freely available by the publisher.

Full text: Download

Green circle
Preprint: archiving allowed
Orange circle
Postprint: archiving restricted
Red circle
Published version: archiving forbidden
Data provided by SHERPA/RoMEO

Abstract

AbstractVaccines based on the spike protein of SARS-CoV-2 are a cornerstone of the public health response to COVID-19. The emergence of hypermutated, increasingly transmissible variants of concern (VOCs) threaten this strategy. Omicron (B.1.1.529), the fifth VOC to be described, harbours multiple amino acid mutations in spike, half of which lie within the receptor-binding domain. Here we demonstrate substantial evasion of neutralization by Omicron BA.1 and BA.2 variants in vitro using sera from individuals vaccinated with ChAdOx1, BNT162b2 and mRNA-1273. These data were mirrored by a substantial reduction in real-world vaccine effectiveness that was partially restored by booster vaccination. The Omicron variants BA.1 and BA.2 did not induce cell syncytia in vitro and favoured a TMPRSS2-independent endosomal entry pathway, these phenotypes mapping to distinct regions of the spike protein. Impaired cell fusion was determined by the receptor-binding domain, while endosomal entry mapped to the S2 domain. Such marked changes in antigenicity and replicative biology may underlie the rapid global spread and altered pathogenicity of the Omicron variant.