Published in
American Society for Microbiology, Microbiology Spectrum, 2(9), 2021
DOI: 10.1128/spectrum.00044-21
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Identification of BvgA-Dependent and BvgA-Independent Small RNAs (sRNAs) in Bordetella pertussis Using the Prokaryotic sRNA Prediction Toolkit ANNOgesic
Journal article published in 2021 by
Kyung Moon,
Minji Sim,
Chin-Hsien Tai,
Kyungyoon Yoo,
Charlotte Merzbacher,
Sung-Huan Yu 
,
David D. Kim,
Jaehyun Lee,
Konrad U. Förstner,
Qing Chen,
Scott Stibitz,
Leslie G. Knipling,
Deborah M. Hinton
,
David D. Kim,
Jaehyun Lee,
Konrad U. Förstner,
Qing Chen,
Scott Stibitz,
Leslie G. Knipling,
Deborah M. Hinton
This paper is made freely available by the publisher.
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Abstract
Noncoding small RNAs (sRNAs) are crucial for posttranscriptional regulation of gene expression in all organisms and are known to be involved in the regulation of bacterial virulence. We have investigated the presence of sRNAs in the obligate human pathogen B. pertussis , using transcriptome sequencing (RNA-seq) and the recently developed prokaryotic sRNA search program ANNOgesic.