Cotton contamination by honeydew is considered one of the significant problems for quality in textiles as it causes stickiness during manufacturing. Therefore, millions of dollars in losses are attributed to honeydew contamination each year. This work presents the use of UV hyperspectral imaging (225–300 nm) to characterize honeydew contamination on raw cotton samples. As reference samples, cotton samples were soaked in solutions containing sugar and proteins at different concentrations to mimic honeydew. Multivariate techniques such as a principal component analysis (PCA) and partial least squares regression (PLS-R) were used to predict and classify the amount of honeydew at each pixel of a hyperspectral image of raw cotton samples. The results show that the PCA model was able to differentiate cotton samples based on their sugar concentrations. The first two principal components (PCs) explain nearly 91.0% of the total variance. A PLS-R model was built, showing a performance with a coefficient of determination for the validation (R2cv) = 0.91 and root mean square error of cross-validation (RMSECV) = 0.036 g. This PLS-R model was able to predict the honeydew content in grams on raw cotton samples for each pixel. In conclusion, UV hyperspectral imaging, in combination with multivariate data analysis, shows high potential for quality control in textiles.