MITI minimum information guidelines for highly multiplexed tissue images

Schapiro, Denis; Yapp, Clarence; Sokolov, Artem; Reynolds, Sheila M.; Sudar, Damir; Xie, Yubin; Muhlich, Jeremy L.; Taylor, Adam J.; Nikolov, Milen; Tyler, Madison; Lin, Jia-Ren; Zhou, Daniel Cui; Factor, Rachel E.; Fatahalian, Kayvon; Feiler, Heidi S.; Fernandez, Jose; Fields, Andrew; Fields, Ryan C.; Fitzpatrick, James A. J.; Ford, James M.; Franklin, Jeff; Network, Human Tumor Atlas; Fulton, Bob; Gaglia, Giorgio; Galdieri, Luciano; Ganesh, Karuna; Gao, Jianjiong; Gaudio, Benjamin L.; Getz, Gad; Gibbs, David L.; Gillanders, William E.; Goecks, Jeremy; Goodwin, Daniel; Gray, Joe W.; Greenleaf, William; Grimm, Lars J.; Gu, Qiang; Guerriero, Jennifer L.; Guha, Tuhin; Guimaraes, Alexander R.; Gutierrez, Belen; Hacohen, Nir; Hanson, Casey Ryan; Harris, Coleman R.; Hawkins, William G.; Heiser, Cody N.; Hoffer, John; Hollmann, Travis J.; Hsieh, James J.; Huang, Jeffrey; Hunger, Stephen P.; Hwang, Eun-Sil; Iacobuzio-Donahue, Christine; Iglesia, Michael D.; Islam, Mohammad; Izar, Benjamin; Jacobson, Connor A.; Janes, Samuel; Jayasinghe, Reyka G.; Jeudi, Tiarah; Johnson, Bruce E.; Johnson, Brett E.; Ju, Tao; Kadara, Humam; Karnoub, Elias-Ramzey; Pe'er, D.; Karpova, Alla; Khan, Aziz; Kibbe, Warren; Kim, Albert H.; King, Lorraine M.; Kozlowski, Elyse; Krishnamoorthy, Praveen; Krueger, Robert; Kundaje, Anshul; Ladabaum, Uri; Laquindanum, Rozelle; Lau, Clarisse; Lau, Ken Siu Kwong; LeBoeuf, Nicole R.; Lee, Hayan; Lenburg, Marc; Leshchiner, Ignaty; Chen, Yu-An; Levy, Rochelle; Li, Yize; Arias-Camison, Raquel; Lian, Christine G.; Liang, Wen; Lim, Kian-Huat; Lin, Yiyun; Liu, David; Arena, Sarah; Abravanel, Daniel L.; Liu, Qi; Liu, Ruiyang; Lo, Joseph; Lo, Pierrette; Achilefu, Samuel; Longabaugh, William J.; Longacre, Teri; Ademuyiwa, Foluso O.; Luckett, Katie; Ma, Cynthia; Maher, Chris; Adey, Andrew C.; Maier, Allison; Makowski, Danika; Aft, Rebecca; Maley, Carlo; Maliga, Zoltan; Manoj, Parvathy; Ahn, Khung Jun; Maris, John M.; Markham, Nick; Chen, Changya; Alikarami, Fatemeh; Yu, Wenbao; Marks, Jeffrey R.; Chen, Chia-Hui; Zhang, Kun; Martinez, Daniel; Chen, Bob; Zhu, Xiangzhu; Alon, Shahar; Mashl, Jay; Chen, Feng; Burlingame, Erik A.; Masilionis, Ignas; Chen, Siqi; Massague, Joan; Ashenberg, Orr; Chheda, Milan G.; Mazurowski, Marciej A.; McKinley, Eliot T.; Chin, Koei; Baker, Ethan; McMichael, Joshua; Cho, Hyeyoung; Meyerson, Matthew; Chun, Jaeyoung; Baker, Gregory J.; Mills, Gordon B.; Bandyopadhyay, Shovik; Mitri, Zahi I.; Cisneros, Luis; Bayguinov, Peter; Moorman, Andrew; Coffey, Robert J.; Beane, Jennifer; Mudd, Jacqueline; Cohen, Ofir; Becker, Winston; Murphy, George F.; Colditz, Graham A.; Bernt, Kathrin; Navin, Nicholas E.; Cole, Kristina A.; Betts, Courtney B.; Nawy, Tal; Collins, Natalie; Bletz, Julie; Blosser, Tim; Ness, Reid M.; Cotter, Daniel; Boire, Adrienne; Nevins, Stephanie; Coussens, Lisa M.; Boland, Genevieve M.; Nirmal, Ajit Johnson; Coy, Shannon; Boyden, Edward S.; Novikov, Edward; Creason, Allison L.; Bucher, Elmar; Oh, Stephen T.; Cui, Yi; Bueno, Raphael; Oldridge, Derek A.; Cai, Qiuyin; Curtis, Christina; Owzar, Kouros; Cambuli, Francesco; Davies, Sherri R.; Pant, Shishir M.; Campbell, Joshua; Park, Wungki; Bruijn, Inode; Cao, Song; Patti, Gary J.; Delorey, Toni M.; Caravan, Wagma; Paul, Kristina; Demir, Emek; Chaligné, Ronan; Pelletier, Roxanne; Chan, Joseph M.; Denardo, David; Persson, Daniel; Chasnoff, Sara; Diep, Dinh; Chatterjee, Deyali; Petty, Candi; Ding, Li; Pfister, Hanspeter; Chen, Alyce A.; DiPersio, John; Polyak, Kornelia; St. Cyr, Jeremy; Dubinett, Steven M.; Puram, Sidharth V.; Eberlein, Timothy J.; Qiu, Qi; Villalonga, Álvaro Quintanal; Eddy, James A.; Ramirez, Marisol Adelina; Rashid, Rumana; Reeb, Ashley N.; Reid, Mary E.; Remsik, Jan; Riesterer, Jessica L.; Risom, Tyler; Ritch, Cecily Claire; Rolong, Andrea; Rudin, Charles M.; Ryser, Marc D.; Sato, Kazuhito; Sears, Cynthia L.; Esplin, Edward D.; Semenov, Yevgeniy R.; Shen, Jeanne; Shoghi, Kooresh I.; Shrubsole, Martha J.; Shyr, Yu; Sibley, Alexander B.; Simmons, Alan J.; Sinha, Anubhav; Sivagnanam, Shamilene; Song, Sheng-Kwei; Southar-Smith, Austin; Spira, Avrum E.; Farhi, Samouil L.; Stefankiewicz, Stephanie; Storrs, Erik P.; Stover, Elizabeth H.; Thorsson, Vésteinn; Strand, Siri H.; Straub, Cody; Street, Cherease; Su, Timothy; Venkatamohan, Nithya; Surrey, Lea F.; Suver, Christine; Tan, Kai; Kay Washington, M.; Terekhanova, Nadezhda V.; Ternes, Luke; Thadi, Anusha; Thomas, George; Tibshirani, Rob; Umeda, Shigeaki; Gutman, David A.; Uzun, Yasin; Mazzilli, S. A.; Vallius, Tuulia; Van Allen, Eliezer R.; Vandekar, Simon; Herrmann, Markus D.; Vega, Paige N.; Veis, Deborah J.; Vennam, Sujay; Chen, Y.-A.; Gehlenborg, Nils; Verma, Ana; Vigneau, Sebastien; Wagle, Nikhil; Washington, M. Kay; Wahl, Richard; Walle, Thomas; Wang, Liang-Bo; Roland, Joseph T.; Warchol, Simon; Watson, Cameron; Herndon, John M.; Weimer, Annika K.; Wendl, Michael C.; West, Robert B.; Snyder, Michael P.; White, Shannon; Windon, Annika L.; Deen, Nataly Naser Al; Wu, Hao; Wu, Chi-Yun; Wu, Yige; Nolan, Garry; Wyczalkowski, Matthew A.; Xu, Jason; Yao, Lijun; Swedlow, Jason R.; Schultz, Nikolaus; Merrick, Daniel T.; Pe’er, Dana; Mazzili, Sarah A.; Rodig, Scott J.; Santagata, Sandro; Sorger, Peter K.; Cyr, Jeremy St.; Chang, Young H.; Drewes, Julia L.; Cynthia,; Bankhead, Peter; Angelo, Michael; Cerami, Ethan

Published in

Nature Research, Nature Methods, 3(19), p. 262-267, 2022

DOI: 10.1038/s41592-022-01415-4

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MITI minimum information guidelines for highly multiplexed tissue images

Journal article published in 2022 by Denis Schapiro, Clarence Yapp, Artem Sokolov

, Sheila M. Reynolds, Damir Sudar, Yubin Xie

, Jeremy L. Muhlich

, Adam J. Taylor, Milen Nikolov, Madison Tyler, Jia-Ren Lin, Daniel Cui Zhou, Rachel E. Factor, Kayvon Fatahalian, Heidi S. Feiler and other authors.

This paper is made freely available by the publisher.

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MITI minimum information guidelines for highly multiplexed tissue images