Abstract Nitrogen (N) enrichment from excessive fertilization in managed forests affects biogeochemical cycles on multiple scales, but our knowledge of how N availability shifts multi-nutrient stoichiometries (including macronutrients: N, phosphorus, potassium, calcium, magnesium and micronutrients: manganese, iron and zinc) within and among organs (root, stem and leaf) remains limited. To understand the difference among organs in terms of multi-nutrient stoichiometric homeostasis responding to N fertilization, a six-level N supply experiment was conducted through a hydroponic system to examine stem growth, multi-nutrient concentrations and stoichiometric ratios in roots, stems and leaves of 2-year-old Chinese hickory (Carya cathayensis Sarg.) saplings. Results showed that N supply significantly enhanced leaf length, width, basal diameter and sapling height. Increasing the rates of N also significantly altered multi-nutrient concentrations in roots, stems and leaves. Macronutrients generally respond more positively than micronutrients within organs. Among organs, leaves and stems generally responded more actively to N supply than roots. The stoichiometric ratios of nutrients within different organs changed significantly with N supply, but their direction and degree of change varied by organ. Specifically, increased N supply reduced the ratios of both macronutrients and micronutrients to N in plant organs, while increased N supply elevated the ratios of P to other nutrients. With N fertilization, ratios of micronutrients decreased in leaves and stems and increased in roots. In particular, leaf N and stem Mn stoichiometries responded strongly to N availability, indicating stimulated N uptake but a decreased risk of Mn2+ accumulation to excessive N. Overall, Chinese hickory saplings responded positively to increasing N availability in terms of stem growth, but the multi-nutrient stoichiometric homeostasis was distinctively organ-dependent. These results are expected to enhance our understanding of N-induced changes in homeostasis of multiple nutrients at the organ level and may offer new insights into how plants adapt to increasing N fertilization.