Abstract Various field studies on plankton dynamics have broadened our understanding of seasonal succession patterns. Additionally, laboratory experiments have described consumers ranging from generalists to selective grazers. While both approaches can give us a good understanding of the ecosystem and its dynamics, drawbacks in identification and a limited coverage of the ecosystem have left open questions on the generality of previous results. Using an integrative approach, we investigated water samples taken at Helgoland Roads by metabarcoding to describe seasonal succession patterns of the whole plankton community. By use of network analysis, we also tried to identify predator–prey dynamics. Our data set depicted the strong seasonality typically found for temperate waters. Despite a stable background community surviving strong fluctuations, small and abrupt changes, such as pronounced blooms and random appearance of autotrophs, cause seasons to be quite different in an inter-year comparison. Main consumers were copepods, ciliates, and dinoflagellates, of which the latter were most abundant. Furthermore, our results suggest that zooplankton predators might favour specific prey during certain time periods but seem to be quite opportunistic otherwise throughout the year. The variability and potential for many different relationships in the plankton community might be an indicator of resilience in the system.