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Humana Press, Methods in Molecular Biology, p. 91-103, 2012

DOI: 10.1007/978-1-61779-603-6_5

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Exploring bacterial insertion sequences with ISfinder: objectives, uses, and future developments.

Journal article published in 2012 by P. Siguier, A. Varani, J. Perochon, M. Chandler ORCID
This paper is available in a repository.
This paper is available in a repository.

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Abstract

We describe here the use of the ISfinder database and its associated software. ISfinder was conceived -initially as a comprehensive database for prokaryotic insertion sequences (ISs). It now includes software for visualising complete and partial IS copies in whole genomes (ISbrowser) and for high-quality genome annotation (Insertion Sequence Semi-automatic Genome Annotation).