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American Chemical Society, Biochemistry, 25(48), p. 5782-5784, 2009

DOI: 10.1021/bi900781u

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Significantly Improved Sensitivity of Q-Band PELDOR/DEER Experiments Relative to X-Band Is Observed in Measuring the Intercoil Distance of a Leucine Zipper Motif Peptide (GCN4-LZ)

This paper is available in a repository.
This paper is available in a repository.

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Abstract

Pulsed Electron Double Resonance (PELDOR)/Double Electron-Electron Resonance (DEER) spectroscopy is a very powerful structural biology tool in which the dipolar coupling between two unpaired electron spins (site-directed nitroxide spin labels) is measured. These measurements are typically conducted at X-band (9.4 GHz) microwave excitation using the 4-pulse DEER sequence and can often require up to 12+ hours of signal averaging for biological samples (depending upon spin label concentration). In this rapid report, we present for the first time, a substantial increase in DEER sensitivity obtained by collecting DEER spectra at Q-band (34 GHz), when compared to X-band. The huge boost in sensitivity (factor of 13) demonstrated at Q-band represents 169-fold decrease in data-collection time, reveals greatly improved frequency spectrum, higher quality distance data, and significantly increases sample throughput. Thus, the availability of Q-band DEER spectroscopy should have a major impact on structural biology studies using site-directed spin labeling EPR techniques.