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Oxford University Press (OUP), Bioinformatics, 18(25), p. 2434-2435

DOI: 10.1093/bioinformatics/btp403

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SNP-o-matic

Journal article published in 2009 by Heinrich Magnus Manske ORCID, Dominic P. Kwiatkowski
This paper is made freely available by the publisher.
This paper is made freely available by the publisher.

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Abstract

Motivation: High throughput sequencing technologies generate large amounts of short reads. Mapping these to a reference sequence consumes large amounts of processing time and memory, and read mapping errors can lead to noisy or incorrect alignments. SNP-o-matic is a fast, memory-efficient and stringent read mapping tool offering a variety of analytical output functions, with an emphasis on genotyping.