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American Society for Microbiology, Journal of Bacteriology, 17(200), 2018

DOI: 10.1128/jb.00251-18

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σ <sup>I</sup> from Bacillus subtilis: Impact on Gene Expression and Characterization of σ <sup>I</sup> -Dependent Transcription That Requires New Types of Promoters with Extended −35 and −10 Elements

This paper is made freely available by the publisher.
This paper is made freely available by the publisher.

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Abstract

In bacteria, σ factors are essential for transcription initiation. Knowledge about their regulons (i.e., genes transcribed from promoters dependent on these σ factors) is the key for understanding how bacteria cope with the changing environment and could be instrumental for biotechnologically motivated rewiring of gene expression. Here, we characterize the σ I regulon from the industrially important model Gram-positive bacterium Bacillus subtilis . We reveal that σ I affects expression of ∼130 genes, of which 16 are directly regulated by σ I , including genes encoding proteins involved in iron homeostasis. Detailed analysis of promoter elements then identifies unique sequences important for σ I -dependent transcription. This study thus provides a comprehensive view on this underexplored component of the B. subtilis transcription machinery.