Researcher
David Baker
University of Washington Howard Hughes Medical Institute
Statistics
41 papers found
All papers authored by David Baker
Refreshing results…
Danny D. Sahtoe 
,
Ewa A. Andrzejewska ,
Hannah L. Han ,
Enrico Rennella,
Matthias M. Schneider ,
Georg Meisl ,
Maggie Ahlrichs ,
Justin Decarreau,
Hannah Nguyen ,
Alex Kang,
Paul Levine,
Mila Lamb,
Xinting Li,
Asim K. Bera ,
Lewis E. Kay
and 2 other authors
,
Ewa A. Andrzejewska ,
Hannah L. Han ,
Enrico Rennella,
Matthias M. Schneider ,
Georg Meisl ,
Maggie Ahlrichs ,
Justin Decarreau,
Hannah Nguyen ,
Alex Kang,
Paul Levine,
Mila Lamb,
Xinting Li,
Asim K. Bera ,
Lewis E. Kay
and 2 other authors
Design of amyloidogenic peptide traps
Upload
Rohith Krishna ,
Jue Wang ,
Woody Ahern ,
Pascal Sturmfels,
Preetham Venkatesh ,
Indrek Kalvet ,
Gyu Rie Lee ,
Felix S. Morey-Burrows ,
Ivan Anishchenko,
Ian R. Humphreys ,
Ryan McHugh,
Dionne Vafeados ,
Xinting Li ,
George A. Sutherland ,
Andrew Hitchcock
and 7 other authors
,
Jue Wang ,
Woody Ahern ,
Pascal Sturmfels,
Preetham Venkatesh ,
Indrek Kalvet ,
Gyu Rie Lee ,
Felix S. Morey-Burrows ,
Ivan Anishchenko,
Ian R. Humphreys ,
Ryan McHugh,
Dionne Vafeados ,
Xinting Li ,
George A. Sutherland ,
Andrew Hitchcock
and 7 other authors
Generalized biomolecular modeling and design with RoseTTAFold All-Atom
Upload
Zhe Li ,
Shunzhi Wang ,
Una Nattermann ,
Asim K. Bera ,
Andrew J. Borst ,
Muammer Y. Yaman ,
Matthew J. Bick,
Erin C. Yang ,
William Sheffler,
Byeongdu Lee ,
Soenke Seifert,
Greg L. Hura,
Hannah Nguyen ,
Alex Kang,
Radhika Dalal
and 16 other authors
,
Shunzhi Wang ,
Una Nattermann ,
Asim K. Bera ,
Andrew J. Borst ,
Muammer Y. Yaman ,
Matthew J. Bick,
Erin C. Yang ,
William Sheffler,
Byeongdu Lee ,
Soenke Seifert,
Greg L. Hura,
Hannah Nguyen ,
Alex Kang,
Radhika Dalal
and 16 other authors
Accurate computational design of three-dimensional protein crystals
Upload
Neville P. Bethel ,
Brunette Tj,
Andrew J. Borst ,
Fabio Parmeggiani ,
Matthew J. Bick,
Hannah Nguyen,
Alex Kang,
Asim K. Bera ,
Lauren Carter,
Marcos C. Miranda ,
Ryan D. Kibler ,
Mila Lamb,
Xinting Li,
Banumathi Sankaran ,
David Baker
,
Brunette Tj,
Andrew J. Borst ,
Fabio Parmeggiani ,
Matthew J. Bick,
Hannah Nguyen,
Alex Kang,
Asim K. Bera ,
Lauren Carter,
Marcos C. Miranda ,
Ryan D. Kibler ,
Mila Lamb,
Xinting Li,
Banumathi Sankaran ,
David Baker
Precisely patterned nanofibres made from extendable protein multiplexes
Upload
Robbert J. de Haas ,
Natalie Brunette ,
Alex Goodson ,
Justas Dauparas ,
Sue Y. Yi,
Erin C. Yang,
Quinton Dowling ,
Hannah Nguyen ,
Alex Kang ,
Asim K. Bera ,
Banumathi Sankaran,
Renko de Vries,
David Baker ,
Neil P. King
,
Natalie Brunette ,
Alex Goodson ,
Justas Dauparas ,
Sue Y. Yi,
Erin C. Yang,
Quinton Dowling ,
Hannah Nguyen ,
Alex Kang ,
Asim K. Bera ,
Banumathi Sankaran,
Renko de Vries,
David Baker ,
Neil P. King
Rapid and automated design of two-component protein nanomaterials using ProteinMPNN
Download from doi.org
Rubul Mout ,
Ross C. Bretherton,
Justin Decarreau ,
Sangmin Lee ,
Natasha I. Edman ,
Maggie Ahlrichs ,
Yang Hsia ,
Nicole E. Gregorio ,
Danny D. Sahtoe ,
George Ueda ,
Alee Sharma,
Rebecca Schulman,
Cole A. DeForest ,
David Baker
Download from doi.org
,
Ross C. Bretherton,
Justin Decarreau ,
Sangmin Lee ,
Natasha I. Edman ,
Maggie Ahlrichs ,
Yang Hsia ,
Nicole E. Gregorio ,
Danny D. Sahtoe ,
George Ueda ,
Alee Sharma,
Rebecca Schulman,
Cole A. DeForest ,
David Baker
Download from doi.org
Nathaniel R. Bennett ,
Brian Coventry,
Inna Goreshnik,
Buwei Huang,
Aza Allen ,
Dionne Vafeados ,
Ying Po Peng,
Justas Dauparas ,
Minkyung Baek ,
Lance Stewart ,
Frank DiMaio,
Steven De Munck ,
Savvas N. Savvides ,
David Baker
,
Brian Coventry,
Inna Goreshnik,
Buwei Huang,
Aza Allen ,
Dionne Vafeados ,
Ying Po Peng,
Justas Dauparas ,
Minkyung Baek ,
Lance Stewart ,
Frank DiMaio,
Steven De Munck ,
Savvas N. Savvides ,
David Baker
Improving de novo protein binder design with deep learning
Download from doi.org
Jing Yang (John) Wang ,
Alena Khmelinskaia,
William Sheffler,
Marcos C. Miranda,
Aleksandar Antanasijevic,
Andrew J. Borst ,
Susana V. Torres ,
Chelsea Shu,
Yang Hsia ,
Una Nattermann,
Daniel Ellis,
Carl Walkey,
Maggie Ahlrichs ,
Sidney Chan ,
Alex Kang
and 11 other authors
Download from doi.org
,
Alena Khmelinskaia,
William Sheffler,
Marcos C. Miranda,
Aleksandar Antanasijevic,
Andrew J. Borst ,
Susana V. Torres ,
Chelsea Shu,
Yang Hsia ,
Una Nattermann,
Daniel Ellis,
Carl Walkey,
Maggie Ahlrichs ,
Sidney Chan ,
Alex Kang
and 11 other authors
Download from doi.org
2022
B. I. M. Wicky ,
L. F. Milles ,
A. Courbet ,
R. J. Ragotte ,
J. Dauparas ,
E. Kinfu ,
S. Tipps ,
R. D. Kibler ,
M. Baek ,
F. DiMaio ,
X. Li ,
L. Carter ,
A. Kang ,
H. Nguyen ,
A. K. Bera
and 1 other authors
,
L. F. Milles ,
A. Courbet ,
R. J. Ragotte ,
J. Dauparas ,
E. Kinfu ,
S. Tipps ,
R. D. Kibler ,
M. Baek ,
F. DiMaio ,
X. Li ,
L. Carter ,
A. Kang ,
H. Nguyen ,
A. K. Bera
and 1 other authors
Hallucinating symmetric protein assemblies
Upload
Jason Z. Zhang ,
Hsien-Wei Yeh ,
Alexandra C. Walls ,
Basile I. M. Wicky ,
Kaitlin R. Sprouse ,
Laura A. VanBlargan ,
Rebecca Treger,
Alfredo Quijano-Rubio ,
Minh N. Pham,
John C. Kraft ,
Ian C. Haydon ,
Wei Yang,
Michelle DeWitt,
John E. Bowen,
Cameron M. Chow
and 9 other authors
Download from www.nature.com
,
Hsien-Wei Yeh ,
Alexandra C. Walls ,
Basile I. M. Wicky ,
Kaitlin R. Sprouse ,
Laura A. VanBlargan ,
Rebecca Treger,
Alfredo Quijano-Rubio ,
Minh N. Pham,
John C. Kraft ,
Ian C. Haydon ,
Wei Yang,
Michelle DeWitt,
John E. Bowen,
Cameron M. Chow
and 9 other authors
Download from www.nature.com
Andrew C. Hunt ,
James Brett Case ,
Young-Jun Park ,
Longxing Cao ,
Kejia Wu ,
Alexandra C. Walls ,
Zhuoming Liu ,
John E. Bowen ,
Hsien-Wei Yeh ,
Shally Saini ,
Louisa Helms ,
Yan Ting Zhao ,
Tien-Ying Hsiang ,
Tyler N. Starr ,
Inna Goreshnik
and 32 other authors
Upload
,
James Brett Case ,
Young-Jun Park ,
Longxing Cao ,
Kejia Wu ,
Alexandra C. Walls ,
Zhuoming Liu ,
John E. Bowen ,
Hsien-Wei Yeh ,
Shally Saini ,
Louisa Helms ,
Yan Ting Zhao ,
Tien-Ying Hsiang ,
Tyler N. Starr ,
Inna Goreshnik
and 32 other authors
Upload
Danny D. Sahtoe ,
Florian Praetorius ,
Alexis Courbet ,
Yang Hsia ,
Basile Im M. Wicky ,
Natasha I. Edman ,
Lauren M. Miller ,
Bart Jr R. Timmermans ,
Justin Decarreau ,
Hana M. Morris ,
Alex Kang ,
Asim K. Bera ,
David Baker
,
Florian Praetorius ,
Alexis Courbet ,
Yang Hsia ,
Basile Im M. Wicky ,
Natasha I. Edman ,
Lauren M. Miller ,
Bart Jr R. Timmermans ,
Justin Decarreau ,
Hana M. Morris ,
Alex Kang ,
Asim K. Bera ,
David Baker
Reconfigurable asymmetric protein assemblies through implicit negative design
Upload
2021
Ivan Anishchenko ,
Samuel J. Pellock ,
Tamuka M. Chidyausiku ,
Theresa A. Ramelot ,
Sergey Ovchinnikov ,
Jingzhou Hao,
Khushboo Bafna ,
Christoffer Norn ,
Alex Kang,
Asim K. Bera ,
Frank DiMaio,
Lauren Carter,
Cameron M. Chow ,
Gaetano T. Montelione ,
David Baker
,
Samuel J. Pellock ,
Tamuka M. Chidyausiku ,
Theresa A. Ramelot ,
Sergey Ovchinnikov ,
Jingzhou Hao,
Khushboo Bafna ,
Christoffer Norn ,
Alex Kang,
Asim K. Bera ,
Frank DiMaio,
Lauren Carter,
Cameron M. Chow ,
Gaetano T. Montelione ,
David Baker
De novo protein design by deep network hallucination
Download from www.nature.com
Ian R. Humphreys ,
Jimin Pei ,
Sergey Ovchinnikov ,
Jing Zhang ,
Minkyung Baek ,
Aditya Krishnakumar ,
Viktoriya G. Stancheva ,
Ivan Anishchenko ,
Zhi Zheng ,
Sudeep Banjade,
Upasana Roy ,
Saket R. Bagde ,
Barnabas Szakal ,
Xiao-Han Li ,
Travis J. Ness
and 15 other authors
,
Jimin Pei ,
Sergey Ovchinnikov ,
Jing Zhang ,
Minkyung Baek ,
Aditya Krishnakumar ,
Viktoriya G. Stancheva ,
Ivan Anishchenko ,
Zhi Zheng ,
Sudeep Banjade,
Upasana Roy ,
Saket R. Bagde ,
Barnabas Szakal ,
Xiao-Han Li ,
Travis J. Ness
and 15 other authors
Computed structures of core eukaryotic protein complexes
UploadMissing publications? Search for publications with a matching author name.