Alfred Roca - Dissemin

All papers authored by Alfred Roca

This paper was not found in any repository, but could be made available legally by the author.

2023 Alida de Flamingh

, Thomas P. Gnoske, Angel G. Rivera-Colón

, Velizar A. Simeonovski, Julian C. Kerbis Peterhans, Nobuyuki Yamaguchi

, Kelsey E. Witt

, Julian Catchen

, Alfred L. Roca

, Ripan Singh Malhi

Genomic analysis supports Cape Lion population connectivity prior to colonial eradication and extinction

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Wesley C. Au

, Simon G. Dures

, Yasuko Ishida

, Cory E. Green, Kai Zhao, Rob Ogden

, Alfred L. Roca

Lion Localizer: A software tool for inferring the provenance of lions (Panthera leo) using mitochondrial DNA

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Neal R. Benjamin, Richard P. M. A. Crooijmans

, Luke R. Jordan, Courtni R. Bolt, Lawrence B. Schook

, Kyle M. Schachtschneider

, Martien A. M. Groenen

, Alfred L. Roca

Swine global genomic resources: insights into wild and domesticated populations

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This paper is made freely available by the publisher.

Jacob E. Wessels, Yasuko Ishida

, Nelda A. Rivera

, Spencer L. Stirewalt, William M. Brown

, Jan E. Novakofski

, Alfred L. Roca

, Nohra E. Mateus-Pinilla

The Impact of Variation in the Toll-like Receptor 3 Gene on Epizootic Hemorrhagic Disease in Illinois Wild White-Tailed Deer (Odocoileus virginianus)

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2022 Alida de Flamingh

, Angel G. Rivera-Colón

, Tom P. Gnoske, Julian C. Kerbis Peterhans, Julian Catchen

, Ripan S. Malhi

, Alfred L. Roca

Numt Parser: Automated identification and removal of nuclear mitochondrial pseudogenes (numts) for accurate mitochondrial genome reconstruction in Panthera

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

A. de Flamingh, Y. Ishida, P. Pečnerová, S. Vilchis, H. R. Siegismund, R. J. van Aarde, R. S. Malhi, A. L. Roca

Non-invasive fecal DNA yields whole genome and metagenomic data for species conservation

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Evan W. London

, Alfred L. Roca

, Jan E. Novakofski

, Nohra E. Mateus-Pinilla

A De Novo Chromosome-Level Genome Assembly of the White-Tailed Deer, Odocoileus Virginianus

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2021 Tolulope I. N. Perrin-Stowe

, Yasuko Ishida

, Emily E. Terrill, Dan Beetem, Oliver A. Ryder

, Jan E. Novakofski

, Nohra E. Mateus-Pinilla

, Alfred L. Roca

Variation in the PRNP gene of Pere David’s deer (Elaphurus davidianus) may impact genetic vulnerability to chronic wasting disease

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Nelda A. Rivera

, Csaba Varga

, Mark G. Ruder

, Sheena J. Dorak

, Alfred L. Roca

, Jan E. Novakofski

, Nohra E. Mateus-Pinilla

Bluetongue and Epizootic Hemorrhagic Disease in the United States of America at the Wildlife–Livestock Interface

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2020 Hayden D. Hedman

, Csaba Varga

, William M. Brown, Paul Shelton, Alfred L. Roca

, Jan E. Novakofski

, Nohra E. Mateus‐Pinilla

Spatial analysis of chronic wasting disease in free‐ranging white‐tailed deer ( Odocoileus virginianus ) in Illinois, 2008–2019

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Alida de Flamingh

, Ashley Coutu

, Alfred L. Roca

, Ripan S. Malhi

Accurate Sex Identification of Ancient Elephant and Other Animal Remains Using Low-Coverage DNA Shotgun Sequencing Data

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Yasuko Ishida, Ting Tian, Adam L. Brandt

, Amy C. Kelly, Paul Shelton, Alfred L. Roca

, Jan Novakofski

, Nohra E. Mateus-Pinilla

Association of chronic wasting disease susceptibility with prion protein variation in white-tailed deer (Odocoileus virginianus)

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2019 Kai Zhao, Yasuko Ishida, Cory E. Green, Alexis G. Davidson, Frankie A. T. Sitam, Cassidy L. Donnelly, Alida De Flamingh, Tolulope I. N. Perrin-Stowe, Stéphanie Bourgeois, Adam L. Brandt, Stephanie J. Mundis, Rudi J. Van Aarde, Jonathan A. Greenberg, Ripan S. Malhi, Nicholas J. Georgiadis and 2 other authors

Loxodonta Localizer: A Software Tool for Inferring the Provenance of African Elephants and Their Ivory Using Mitochondrial DNA

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Alfred L. Roca

African elephant genetics: enigmas and anomalies $^\dagger $ †

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A. L. Roca

African elephant genetics: enigmas and anomalies

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2018 Ulrike Löber

, Matthew Hobbs, Anisha Dayaram, Kyriakos Tsangaras, Kiersten Jones, David E. Alquezar-Planas, Yasuko Ishida, Joanne Meers, Jens Mayer, Claudia Quedenau, Wei Chen, Rebecca N. Johnson, Peter Timms

, Paul R. Young, Alfred L. Roca

and 1 other authors

Degradation and remobilization of endogenous retroviruses by recombination during the earliest stages of a germ-line invasion

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Adam L. Brandt

, Michelle L. Green, Yasuko Ishida, Alfred L. Roca

, Jan Novakofski

, Nohra E. Mateus-Pinilla

Influence of the geographic distribution of prion protein gene sequence variation on patterns of chronic wasting disease spread in white-tailed deer (Odocoileus virginianus)

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Jessica R. Brandt, Peter J. van Coeverden de Groot, Kelsey E. Witt, Paige K. Engelbrektsson, Kristofer M. Helgen, Ripan S. Malhi, Oliver A. Ryder, Alfred L. Roca

Genetic Structure and Diversity Among Historic and Modern Populations of the Sumatran Rhinoceros (Dicerorhinus sumatrensis)

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Yasuko Ishida, Natalie A. Gugala, Nicholas J. Georgiadis, Alfred L. Roca

Evolutionary and demographic processes shaping geographic patterns of genetic diversity in a keystone species, the African forest elephant (Loxodonta cyclotis )

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Mark S. Springer, William J. Murphy, Alfred L. Roca

Appropriate fossil calibrations and tree constraints uphold the Mesozoic divergence of solenodons from other extant mammals

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All papers authored by Alfred Roca